PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0091s0133.3.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 383aa    MW: 42932.3 Da    PI: 9.4683
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0091s0133.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.13.5e-32249302255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Kaladp0091s0133.3.p 249 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 302
                          9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.15E-15246302IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.3E-28247302IPR009057Homeodomain-like
TIGRFAMsTIGR015579.0E-24249302IPR006447Myb domain, plants
PfamPF002496.6E-7250301IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009944Biological Processpolarity specification of adaxial/abaxial axis
GO:0048481Biological Processplant ovule development
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MELFPAQQPD LSLQISPPNT TTKPTSPWPR RTSSAAEEED HHSMDLQGFW KRALDNNNSA  60
TMAAKPNKNS NTKSSSDHYS DILSLSNPSR SIDNPFEPHH HHSLNNNPLI QHNNPFHQIH  120
HHFQSNPQNQ HHYHHHHQAA AAASFLGHHE QLSFLKPIRG IPIYQSPNFN PNNSTNFLHH  180
HQQQQSVLDG LSYLPSSAAS RAANTSCFMN NNINGGGTVS PCTNNNILLR SSSSRFLSRF  240
PGKRSMRAPR MRWTSTLHAR FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY  300
RTVKTTAGAA ASSDAYENGS SGDNSEDLML DITNPIKKGD HQTWGQQGRT STSNQDRENY  360
HGLWSNSSRY IQRIDYSKLP LQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-16250304458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-16250304458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-16250304458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-16250304458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-16250304458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-16250304458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-16250304458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-16250304458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00174DAPTransfer from AT1G32240Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022756938.12e-96probable transcription factor KAN2 isoform X1
RefseqXP_022756946.11e-96probable transcription factor KAN2 isoform X2
TrEMBLA0A067KUB81e-90A0A067KUB8_JATCU; Uncharacterized protein
STRINGevm.model.supercontig_208.132e-90(Carica papaya)
STRINGAES957832e-90(Medicago truncatula)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.13e-50G2-like family protein