PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0082s0047.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NAC | ||||||||
Protein Properties | Length: 286aa MW: 32346.7 Da PI: 8.5391 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.4 | 2.4e-52 | 10 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppGfrFhPtd+elv++yL++k++++++ + +i++vd+yk++PwdLp +++ +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk Kaladp0082s0047.1.p 10 LPPGFRFHPTDDELVMHYLCRKCASQPIAV-PIIADVDLYKYDPWDLPGMAQYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADK 98 79**************************99.88***************8888899*********************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ + + vg+kk Lvfy g+ap+gek++W+mheyrl Kaladp0082s0047.1.p 99 PIGH--PRPVGIKKALVFYAGKAPRGEKSNWIMHEYRL 134 **99..789***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.58E-63 | 5 | 160 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 60.719 | 10 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.1E-27 | 11 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009611 | Biological Process | response to wounding | ||||
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence Send to blast |
MNMPSTDLNL PPGFRFHPTD DELVMHYLCR KCASQPIAVP IIADVDLYKY DPWDLPGMAQ 60 YGEKEWYFFS PRDRKYPNGS RPNRAAGSGY WKATGADKPI GHPRPVGIKK ALVFYAGKAP 120 RGEKSNWIMH EYRLADVDRT ARKKNSLRLD DWVLCRIYNK KGTIERLVVG GGGRRTGMVE 180 EAEEKKPVIG NAAAGAVNFM SDFVYLDAAS DSIPRLHTDS SCSEQQAVVS PEREVQSERR 240 KKIKDWEDSK NNAMETSAYN YIDSSMDLGQ MSPLQDMFMY LNKPF* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-81 | 5 | 166 | 10 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00121 | DAP | Transfer from AT1G01720 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022748831.1 | 1e-144 | NAC domain-containing protein 2-like | ||||
Swissprot | Q39013 | 1e-129 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A059ZXH8 | 1e-141 | A0A059ZXH8_BOENI; NAC domain-containing protein | ||||
STRING | EOY16357 | 1e-140 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-128 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0082s0047.1.p |