PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0076s0124.2.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Nin-like

Protein Properties

Length: 969aa MW: 106716 Da PI: 5.9864

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0076s0124.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91	9e-29	623	673	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+i l +l++yFs+++kdAA++Lgvc+T+LKriCRq+GI+RWP+Rkik++ Kaladp0076s0124.2.p 623 EKTIGLPVLQQYFSGSLKDAARSLGVCPTTLKRICRQHGINRWPSRKIKKV 673 799**********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	17.132	612	693	IPR003035	RWP-RK domain
Pfam	PF02042	2.8E-25	626	673	IPR003035	RWP-RK domain
SuperFamily	SSF54277	9.32E-22	865	954	No hit	No description
Gene3D	G3DSA:3.10.20.240	4.0E-22	868	950	No hit	No description
PROSITE profile	PS51745	19.88	870	953	IPR000270	PB1 domain
SMART	SM00666	2.0E-21	870	953	IPR000270	PB1 domain
Pfam	PF00564	8.5E-17	871	950	IPR000270	PB1 domain
CDD	cd06407	7.66E-40	871	950	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 969 aa Download sequence Send to blast
MDDDALSPNT ILPATSIDSD FINELLLDGC WVETTDGDEY NSLLSPPMTS APLANSLSNL 60 PDFEAPSSGA NSIPDKDARE EPTETSKAPR KRPLRYSQVE DPAGAKTQDW GAIQKSTSSG 120 KSESYLVDIS EPNKRIWIGP KTNVGTSPSV RDRLMSAIRY LSESTRDRNI LIQIWLPVKS 180 GNKHVLTTNH QPYTIDPNSL SLAQYRNVSE NYQFPAEENS RQSAGLPGRV FLRKVPEWTP 240 DVRCFRQEEY PRIAFAQQLN VQGSLALPVF EQGSGSCLGV VEIVTTCQKI NYRPELETVC 300 RALEAFQLRS SEITGIQNSK ILNDSYIAAS PQISEFLTYT CKAHNLPLAQ TWAPCIQHSN 360 SVGENTTQCM STVDAAYYVG DQKFIGFHEE CCEQHLLGDQ GIVGKAFTTK QLCFAPDITT 420 YSKTDYPLSH HAILFGLCAA VAVRVRSIFT GTADFVLEFF LPVSCKSFED QQRMIGSLWD 480 ILQGCQSLYV VTENDLQEES SALLEIAHGN FNENATSKSD ANPLKKASQE DSSWIANMMG 540 AQNKGKGVSI LLDASKEEPH EEFKMTTSWD NTEDESQPVF EDFDLQQQGP KKAEDGGGVS 600 PTFGGNRPSG SRKSGEKKQT KTEKTIGLPV LQQYFSGSLK DAARSLGVCP TTLKRICRQH 660 GINRWPSRKI KKVGHSLKKL QLVMDSVQGP DGSIQISSFY SKFPELGSPN VSGTSSHSVA 720 KQSDRHNQLN RQHEEASLNP LSIRRKSDDS VHVNPQIETG LLSPLGTTSK SPSSSCSQKS 780 TSSLCYSTGA KQDPLMSNTL GSTDALFGES SENAIKQSCS DAELLQLSIQ HETRLLGRSQ 840 SHKSLPEQPP LEMLPPLPKS TGRVLRDNGA FRLKVTFGEV KVRFSLQRTW VFADLQQEIA 900 KRFNIDDMGK LHLKYLDDDS EWVLLTCDAD LEECLDLHKA AQSQTVKLCV LHAPHTNLGT 960 SFGSSGLS*

Sequence ? help Back to Top

Protein Sequence Length: 969 aa Download sequence Send to blast

MDDDALSPNT ILPATSIDSD FINELLLDGC WVETTDGDEY NSLLSPPMTS APLANSLSNL  60
PDFEAPSSGA NSIPDKDARE EPTETSKAPR KRPLRYSQVE DPAGAKTQDW GAIQKSTSSG  120
KSESYLVDIS EPNKRIWIGP KTNVGTSPSV RDRLMSAIRY LSESTRDRNI LIQIWLPVKS  180
GNKHVLTTNH QPYTIDPNSL SLAQYRNVSE NYQFPAEENS RQSAGLPGRV FLRKVPEWTP  240
DVRCFRQEEY PRIAFAQQLN VQGSLALPVF EQGSGSCLGV VEIVTTCQKI NYRPELETVC  300
RALEAFQLRS SEITGIQNSK ILNDSYIAAS PQISEFLTYT CKAHNLPLAQ TWAPCIQHSN  360
SVGENTTQCM STVDAAYYVG DQKFIGFHEE CCEQHLLGDQ GIVGKAFTTK QLCFAPDITT  420
YSKTDYPLSH HAILFGLCAA VAVRVRSIFT GTADFVLEFF LPVSCKSFED QQRMIGSLWD  480
ILQGCQSLYV VTENDLQEES SALLEIAHGN FNENATSKSD ANPLKKASQE DSSWIANMMG  540
AQNKGKGVSI LLDASKEEPH EEFKMTTSWD NTEDESQPVF EDFDLQQQGP KKAEDGGGVS  600
PTFGGNRPSG SRKSGEKKQT KTEKTIGLPV LQQYFSGSLK DAARSLGVCP TTLKRICRQH  660
GINRWPSRKI KKVGHSLKKL QLVMDSVQGP DGSIQISSFY SKFPELGSPN VSGTSSHSVA  720
KQSDRHNQLN RQHEEASLNP LSIRRKSDDS VHVNPQIETG LLSPLGTTSK SPSSSCSQKS  780
TSSLCYSTGA KQDPLMSNTL GSTDALFGES SENAIKQSCS DAELLQLSIQ HETRLLGRSQ  840
SHKSLPEQPP LEMLPPLPKS TGRVLRDNGA FRLKVTFGEV KVRFSLQRTW VFADLQQEIA  900
KRFNIDDMGK LHLKYLDDDS EWVLLTCDAD LEECLDLHKA AQSQTVKLCV LHAPHTNLGT  960
SFGSSGLS*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010645880.1	0.0	PREDICTED: protein NLP2
Refseq	XP_010645886.1	0.0	PREDICTED: protein NLP2
Refseq	XP_010645896.1	0.0	PREDICTED: protein NLP2
TrEMBL	A0A438JSZ8	0.0	A0A438JSZ8_VITVI; Protein NLP2
TrEMBL	F6I0S7	0.0	F6I0S7_VITVI; Uncharacterized protein
STRING	VIT_03s0038g03710.t01	0.0	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17150.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Phytozome	Kaladp0076s0124.2.p