PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0073s0143.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 459aa MW: 50100.1 Da PI: 7.1314 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 81.6 | 8.8e-26 | 189 | 243 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k +++W peLH++Fv+aveqL G +kA+P++ile+m+ ++Lt+++++SHLQkYR++ Kaladp0073s0143.1.p 189 KVKVDWKPELHRQFVQAVEQL-GVDKAVPSRILEIMGNDCLTRHNIASHLQKYRSH 243 5689*****************.********************************86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 15.836 | 186 | 245 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.4E-24 | 187 | 246 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.27E-15 | 188 | 246 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.4E-24 | 189 | 243 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 3.9E-6 | 192 | 241 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0007165 | Biological Process | signal transduction | ||||
GO:0009658 | Biological Process | chloroplast organization | ||||
GO:0009910 | Biological Process | negative regulation of flower development | ||||
GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process | ||||
GO:0010638 | Biological Process | positive regulation of organelle organization | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:1900056 | Biological Process | negative regulation of leaf senescence | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 459 aa Download sequence Send to blast |
MLAVVSQLGN LNDGHEGSTN QQSAQLEAFT IIGDVEFPDS SSGNLLESID FDDLFNDSEA 60 LPDLQMDPDI LAEFSLSSGE EYCSDLNTTS VEKTAADSDG QTTLGINSSI GLGLVPGSST 120 SSITWQDDHE IVSNRNPDLA AGTTNEKLLS KKCVNYNRPA KATYKSNNKP SGVSSKGASK 180 KGSLVGNRKV KVDWKPELHR QFVQAVEQLG VDKAVPSRIL EIMGNDCLTR HNIASHLQKY 240 RSHRKHLLAR KAEAAGWSQW RRHAYAGGVT ATRAALGKRD QGSPWVVPIQ TIRYPPVTSP 300 TQQHKSIQAP GHHMRPLHVW GHPPVDQSLR PLWPKHSPSY TIQPSPTYPM PQQDSSPYWH 360 NPQTRPQRSR FPAQAIQGFP PHAMCQVEAG EVGAPTRQFG SQPYLNFHPS EESLDAAIGD 420 VLSKPWLPLP IGLKPPELDS VMGELQRNGI PNIPPACA* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00022 | PBM | Transfer from AT2G20570 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007149809.1 | 1e-114 | hypothetical protein PHAVU_005G100700g | ||||
TrEMBL | A0A067EF82 | 1e-114 | A0A067EF82_CITSI; Uncharacterized protein | ||||
TrEMBL | A0A2H5PT75 | 1e-114 | A0A2H5PT75_CITUN; Uncharacterized protein | ||||
STRING | XP_007149809.1 | 1e-114 | (Phaseolus vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G20570.1 | 2e-73 | GBF's pro-rich region-interacting factor 1 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0073s0143.1.p |