PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0073s0026.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 365aa MW: 39728.1 Da PI: 7.726 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.1 | 7.3e-32 | 193 | 248 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGG+++A Pk+i+elmkv+gLt+++vkSHLQkYRl+ Kaladp0073s0026.1.p 193 KQRRCWSPELHRRFIHALQQLGGPHVASPKQIKELMKVDGLTNDEVKSHLQKYRLH 248 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 15.314 | 190 | 250 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 6.27E-18 | 190 | 251 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.2E-28 | 191 | 251 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.8E-26 | 193 | 248 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.0E-8 | 195 | 246 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 365 aa Download sequence Send to blast |
MDFAEKMHKC SEYVEALEVE RRKIQVFRRE LPLCLELVSQ AIDACRQQLS TAAAAGTSRE 60 CFHVRRQQRS ECSEQTSCHG PVLEEFIPIK RAASCSSECE EEEDESSQKS GDKPAGKKSD 120 WLRSVQLWNQ SSDPAPASEV KKNVGAFRPF NKESKAVVAA AEMAERQPVE DKPASSTTLK 180 SRNEESGQAT QRKQRRCWSP ELHRRFIHAL QQLGGPHVAS PKQIKELMKV DGLTNDEVKS 240 HLQKYRLHMR RPGAAAPSSA IWVAPPDSAA PALEPAATTS SSDQPEANNS KKEARVYAPV 300 STVGTPYAQP ATQTSDQKVR SGSHCEEDDN GSHSTHGGAG AHCRSPASSS STHTTATASP 360 MPSS* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003631224.1 | 1e-106 | PREDICTED: myb family transcription factor EFM | ||||
Swissprot | Q9FPE8 | 1e-88 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A438ECN5 | 1e-105 | A0A438ECN5_VITVI; Transcription factor HHO3 | ||||
STRING | XP_010695844.1 | 1e-103 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 2e-87 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0073s0026.1.p |
Publications ? help Back to Top | |||
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