PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0071s0377.3.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 323aa    MW: 36225.3 Da    PI: 10.3439
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0071s0377.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.52.7e-32254307255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  Kaladp0071s0377.3.p 254 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 307
                          9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.79E-15251307IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-28252307IPR009057Homeodomain-like
TIGRFAMsTIGR015577.0E-24254307IPR006447Myb domain, plants
PfamPF002495.1E-7255306IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MELFPAQQPD LSLQISPPNT TKPRPPWPRR PSSPEGHQHN SMELQGFLKR ALDNNNSSTM  60
AAAAAATEKP NNKSNNNNNT KSSLSDHYSD ILSLSNPRSI DNPFEPPHSH HHLLNHNPLT  120
HHNPFHHYSQ SNTQNQHPTP HLHQAPASFL GHHEQLSFLK PIRGIPIYQS PNFNASNTNF  180
LHNQQQQHHH YLQHSVLDSL SYLPSASATR SNTSCFMNNK INEGSINPSS NNNNLMSSSR  240
FLSRFPGKRS LRAPRMRWTS TLHARFVHAV ELLGGHERAT PKSVLELMDV KDLTLAHVKS  300
HLQMYRTVKT TDRAAASSST CL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A1e-16255309458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B1e-16255309458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A1e-16255309458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C1e-16255309458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D1e-16255309458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F1e-16255309458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H1e-16255309458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J1e-16255309458Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_021887192.13e-72probable transcription factor KAN2 isoform X1
TrEMBLA0A067E8Y53e-70A0A067E8Y5_CITSI; Uncharacterized protein
STRINGevm.model.supercontig_208.131e-71(Carica papaya)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.14e-46G2-like family protein