PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0070s0167.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 311aa MW: 33743.5 Da PI: 7.4051 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 99.1 | 3e-31 | 27 | 80 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+++LGG+ekAtPk +l++m+v gLt++hvkSHLQ+YR+ Kaladp0070s0167.1.p 27 PRLRWTPELHSCFVQAIDKLGGQEKATPKLLLQVMHVRGLTISHVKSHLQMYRS 80 8****************************************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.7E-29 | 23 | 83 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 11.387 | 23 | 83 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 2.87E-15 | 26 | 82 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 6.5E-24 | 27 | 81 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 2.6E-7 | 28 | 79 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence Send to blast |
MVSCGRGGGA GGSAGGGVRQ YVRSTVPRLR WTPELHSCFV QAIDKLGGQE KATPKLLLQV 60 MHVRGLTISH VKSHLQMYRS MKSDLSRQVN LNSSDTSKQS FEDHDGDADE EQDDDHNKMT 120 LHNHPSKPTS ESDSHFIYNN SVDCINPPKR ARFEMSGSSS VYEEDARVVV HDHRRAGGII 180 YDTVIISAAG PFSSSSAMLL QNPYSRSINA PLGFPVKESN FLQVVNKVDR NGFNRRVICK 240 AGTEDDDHRT GLSLSLSLVH PSTNRSVASS TSEASETVVS SSPTYSKGFS NSFADRPSIN 300 LDLSIALCGT * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4r_A | 7e-20 | 28 | 82 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 7e-20 | 28 | 82 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 7e-20 | 28 | 82 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 7e-20 | 28 | 82 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 8e-28 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0070s0167.1.p |