PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0070s0140.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Nin-like | ||||||||
Protein Properties | Length: 174aa MW: 19878 Da PI: 10.2572 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 84.1 | 1.3e-26 | 54 | 102 | 3 | 51 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 ++i+ledl +yF+lpik+A+k L+v+lTvLK++CR++GI+RWPhRkik Kaladp0070s0140.2.p 54 SRIQLEDLVQYFDLPIKEASKRLKVGLTVLKKKCREFGIPRWPHRKIKC 102 689********************************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 18.326 | 38 | 124 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.9E-22 | 56 | 101 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence Send to blast |
MSEVHQLRRP GHGLDLDLNL PPYSEASLSD SQSSRNDSSD SACESKRSES KVASRIQLED 60 LVQYFDLPIK EASKRLKVGL TVLKKKCREF GIPRWPHRKI KCLDGLIHTL EVEVERQLQD 120 NKAVAMAVAS KKQMLESEKG ALKRKPFMEL QSETKRLRQD VYKRRFLARA CKI* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020532738.1 | 4e-59 | protein RKD5 | ||||
Swissprot | O81791 | 4e-43 | RKD5_ARATH; Protein RKD5 | ||||
TrEMBL | A0A067LHU7 | 1e-57 | A0A067LHU7_JATCU; Uncharacterized protein | ||||
STRING | cassava4.1_024901m | 1e-57 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35590.1 | 1e-44 | RWP-RK domain-containing protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0070s0140.2.p |
Publications ? help Back to Top | |||
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