PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0070s0084.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 406aa MW: 43427.7 Da PI: 9.3165 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 121 | 4.1e-38 | 84 | 144 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e lkcprCdstntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+n k+s Kaladp0070s0084.2.p 84 PEPRLKCPRCDSTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNSKRS 144 67789***************************************************98865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 4.0E-35 | 68 | 142 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.3E-31 | 87 | 142 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 29.366 | 88 | 142 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 90 | 126 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009640 | Biological Process | photomorphogenesis | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 406 aa Download sequence Send to blast |
MVFSSVPLYL DPHNWHHHQQ QQQAQLHQQL SGGGHGGGDN PHPQNHQIGA QMPPPGASQA 60 VGASSSIRPG SMADRARQAK IPQPEPRLKC PRCDSTNTKF CYFNNYSLTQ PRHFCKTCRR 120 YWTRGGALRN VPVGGGCRRN SKRSGKPKAL GGERQAGAGP VNNNNSTSPI SSNSNNNDMN 180 NNSNLLDSIS HQNSFHHQPR LAQFPLLASL QGLAAHGQYT SPSSNIGLNF GGMMNSNAAQ 240 GELGFQIGAS SGASDQWRPH HFPNFLAGFD PPQLPHPPSS ASLFQFPIDH QSMDQAAAAN 300 PHTGPRTTSI SSAVNQQQPA CRPSSMPSNN DQQNNEAAAA VKAEEAAGQQ GGLNMNMNMN 360 LLSRSFLGMP DNSNGQYWIG SSNNNSNATS WTDLSGLNSS TTSLL* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00407 | DAP | Transfer from AT3G55370 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G55370.1 | 4e-45 | OBF-binding protein 3 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0070s0084.2.p |