PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0062s0040.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

G2-like

Protein Properties

Length: 266aa MW: 29120.3 Da PI: 9.8098

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0062s0040.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.1	2.9e-31	93	148	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r+ W+++LH+rF++ ++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Kaladp0062s0040.1.p 93 KQRRSWSQDLHRRFLHSLQQLGGADVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 148 79****************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51294	12.028	90	150	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	3.0E-27	91	151	IPR009057	Homeodomain-like
SuperFamily	SSF46689	2.54E-17	91	151	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	1.8E-26	93	148	IPR006447	Myb domain, plants
Pfam	PF00249	1.6E-5	95	146	IPR001005	SANT/Myb domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence Send to blast
MDESSEKSWH KSDWLRSVQL WNQSPDPPPK SEELSGEGLV AKKAKRSDNG EETKSVEEIH 60 GQTNGSSTSE TKEPQKSGGS KKEDREGSLS RRKQRRSWSQ DLHRRFLHSL QQLGGADVAT 120 PKQIRELMKV DGLTNDEVKS HLQKYRLHTR RPAPPPSQAS GSEAQAPQFV VVGGVWAPPS 180 DYTTMALPVP ANSEGDRASG APRSGMYTPM AAPPLALPHH QCQQFEFNQK PQVKSKNSES 240 RGDGLARCIS LSMSSATRSG PSPVY*

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250\|UniProtKB:Q9FX67}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009356299.1	3e-63	PREDICTED: myb family transcription factor EFM-like
Swissprot	Q9FPE8	1e-51	HHO3_ARATH; Transcription factor HHO3
TrEMBL	A0A498HLS2	1e-60	A0A498HLS2_MALDO; Uncharacterized protein
STRING	XP_009356299.1	1e-62	(Pyrus x bretschneideri)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	3e-54	G2-like family protein

Link Out ? help Back to Top
Phytozome	Kaladp0062s0040.1.p

Publications ? help Back to Top
Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis. Plant Cell Physiol., 2016. 57(6): p. 1142-52 [PMID:27016098]