PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0061s0109.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | WRKY | ||||||||
Protein Properties | Length: 310aa MW: 33991.5 Da PI: 10.4481 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 31.7 | 3.1e-10 | 290 | 309 | 3 | 22 |
-SS-EEEEEEE--TT-SS-E CS WRKY 3 DgynWrKYGqKevkgsefpr 22 D y+WrKYGqK++kgs++pr Kaladp0061s0109.3.p 290 DDYSWRKYGQKPIKGSPHPR 309 99*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 4.9E-15 | 242 | 286 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 1.3E-9 | 276 | 309 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 12.805 | 283 | 309 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.44E-7 | 286 | 309 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.8E-6 | 290 | 309 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 310 aa Download sequence Send to blast |
MEGVEGANRA AVESCNKVLN LLSHHPPAPQ DQIPCRNLMV ETGEAVGRFR KVVSLLGRTV 60 GHARARMSKN LPTPEVPLLK EFESSQNAKV DHQAVSFLSL SSNLGENVKQ ESGPSVTRSV 120 ACSENPSLSL EIGLGSNNNQ PAQIGDPQQH HQQLLLQQQR VQQHQLMKHR FQQQQQAEVM 180 FSKSSSGMSL NFESSSCTPT MSSNRSFMSS LSMDGSVANA NGGAFQYFGA TRSLDHNLLL 240 QKKRCSGRGE SGSLKCGSSR CHCLKKRKHR VRRSIKVPAI SNKLADIPPD DYSWRKYGQK 300 PIKGSPHPR* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011026033.1 | 1e-102 | PREDICTED: probable WRKY transcription factor 21 | ||||
Refseq | XP_011026034.1 | 1e-102 | PREDICTED: probable WRKY transcription factor 21 | ||||
TrEMBL | B9H8I2 | 1e-100 | B9H8I2_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0005s24100.1 | 1e-100 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04670.2 | 1e-50 | WRKY DNA-binding protein 39 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0061s0109.3.p |