PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0060s0452.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 376aa MW: 41688.3 Da PI: 4.8587 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 105.7 | 2.6e-33 | 92 | 146 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFveav+qLGG+++AtPk +l++m+v gLt++hvkSHLQkYRl Kaladp0060s0452.1.p 92 KQRLRWTNDLHDRFVEAVAQLGGPDRATPKGVLRVMGVSGLTIYHVKSHLQKYRL 146 79****************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 13.908 | 89 | 149 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 1.77E-17 | 91 | 146 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 9.1E-32 | 91 | 147 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.5E-26 | 92 | 147 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 6.3E-9 | 94 | 145 | IPR001005 | SANT/Myb domain |
Pfam | PF14379 | 2.2E-23 | 177 | 223 | IPR025756 | MYB-CC type transcription factor, LHEQLE-containing domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 376 aa Download sequence Send to blast |
MRVYVDFGVD KEHFNPTFLV DLIEFVMEEV GGSSVSYCWV FDGCAEMRAT PLDLASEKSS 60 AQGKPSHGRE SNMEPGGGDS NNQSSNPNLA SKQRLRWTND LHDRFVEAVA QLGGPDRATP 120 KGVLRVMGVS GLTIYHVKSH LQKYRLAKYL PDSSSDGKVE NKESGDTGSS QDGSAGMQIT 180 EALKLQMEVQ KRLHEQLEVQ RQLQLRIEAQ GKYLKKIIEE QQRLGVFTLE EDPAPATDIP 240 QSNNSKIDSA GPGPASRFSL EDKSNNLFTD KRHFVDEAFP YLQEPLTPDS ACDRNSPTES 300 LKDDQPFKKQ RLSVNMNEPF DRPENEVSPQ MVEGSTPLHQ QPSSGPFTQL QFDLTPGISV 360 RDEDRAEKLP GGSYL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-23 | 92 | 149 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-23 | 92 | 149 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 1e-23 | 92 | 149 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-23 | 92 | 149 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-23 | 92 | 149 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-23 | 92 | 149 | 1 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-23 | 92 | 149 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-23 | 92 | 149 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-23 | 92 | 149 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-23 | 92 | 149 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-23 | 92 | 149 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-23 | 92 | 149 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006373551.1 | 1e-110 | myb family transcription factor PHL7 isoform X1 | ||||
Refseq | XP_024443124.1 | 1e-110 | myb family transcription factor PHL7 isoform X3 | ||||
Swissprot | Q9SJW0 | 8e-94 | PHL7_ARATH; Myb family transcription factor PHL7 | ||||
TrEMBL | A0A2I4KK58 | 1e-108 | A0A2I4KK58_POPTR; G2-like family protein | ||||
TrEMBL | B9N3W8 | 1e-108 | B9N3W8_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0016s00310.1 | 1e-109 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01060.1 | 2e-80 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0060s0452.1.p |