PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0058s0209.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NAC | ||||||||
Protein Properties | Length: 305aa MW: 34599 Da PI: 5.5387 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 156.2 | 1.4e-48 | 10 | 138 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lppGfrF+P+deel+++yL kk++++++ ++ e+d++++ePw+Lp+++k + +ewyfFs rd+kyatg r+nrat+ gyWkatgkd+ Kaladp0058s0209.1.p 10 LPPGFRFNPSDEELICHYLYKKIANEEVLK-GTLMEIDLHTCEPWQLPEMAKLNASEWYFFSFRDRKYATGYRTNRATTCGYWKATGKDR 98 79*************************655.78***************88888999********************************** PP NAM 91 evlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129 +v++ + e+vg++ktLvfy +rap+g k+ W+mhe+rle Kaladp0058s0209.1.p 99 TVHDPiTFEVVGMRKTLVFYLNRAPNGIKSGWIMHEFRLE 138 ****988899***************************985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.36E-59 | 8 | 156 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 56.578 | 10 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.2E-27 | 11 | 137 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 305 aa Download sequence Send to blast |
MGLKDIGATL PPGFRFNPSD EELICHYLYK KIANEEVLKG TLMEIDLHTC EPWQLPEMAK 60 LNASEWYFFS FRDRKYATGY RTNRATTCGY WKATGKDRTV HDPITFEVVG MRKTLVFYLN 120 RAPNGIKSGW IMHEFRLESP HTPPKEDWVL CRVFYKSKQG ENTNTTSPIS PPPNTFQNNL 180 HKPAIPSSSP PNNTTNNNTI SITPQNNNTF HKQSTILHCE YQPQIMSLNP NSIVHHLVLE 240 PDQMADATPI SIGALACSGD HADDDCLRFL WELKEDDNND MDIISTLDDQ MGFEVDGNSM 300 VLFP* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-45 | 9 | 162 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-45 | 9 | 162 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-45 | 9 | 162 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-45 | 9 | 162 | 16 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-45 | 9 | 162 | 19 | 174 | NAC domain-containing protein 19 |
3swm_B | 3e-45 | 9 | 162 | 19 | 174 | NAC domain-containing protein 19 |
3swm_C | 3e-45 | 9 | 162 | 19 | 174 | NAC domain-containing protein 19 |
3swm_D | 3e-45 | 9 | 162 | 19 | 174 | NAC domain-containing protein 19 |
3swp_A | 3e-45 | 9 | 162 | 19 | 174 | NAC domain-containing protein 19 |
3swp_B | 3e-45 | 9 | 162 | 19 | 174 | NAC domain-containing protein 19 |
3swp_C | 3e-45 | 9 | 162 | 19 | 174 | NAC domain-containing protein 19 |
3swp_D | 3e-45 | 9 | 162 | 19 | 174 | NAC domain-containing protein 19 |
4dul_A | 2e-45 | 9 | 162 | 16 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-45 | 9 | 162 | 16 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007050267.1 | 1e-116 | PREDICTED: NAC domain-containing protein 21/22 | ||||
TrEMBL | A0A061DNM9 | 1e-115 | A0A061DNM9_THECC; NAC domain protein, IPR003441 | ||||
STRING | EOX94424 | 1e-115 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.1 | 3e-87 | NAC domain containing protein 74 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0058s0209.1.p |