PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0055s0184.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 398aa    MW: 43355.7 Da    PI: 4.5343
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0055s0184.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM51.14.5e-1691493128
                  NAM   3 pGfrFhPtdeelvveyLkkkvegkk..leleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk 88 
                          pG  F+P +ee+v +yLk  ++g +    +e+++++vd+y    Pw++ ++ + ++ +  fF+ ++  ++++ r +r +   g+Wk +  
  Kaladp0055s0184.1.p   9 PGRVFNPAEEEIVGFYLKLAATGMPlpPFVESAVRRVDVYGNqAPWEIFAE-ELGRGSRVFFAITRLVKRSKGRMSRvVGGGGTWKGQSV 97 
                          8999********************964233457******97648****732.2344456777777777778889999566699******* PP

                  NAM  89 dkevlskkgelvglkktLvfy..............kgrapkgektdWvmheyrl 128
                          ++e+ +  g ++ ++ tL f               +++++k  +t+W m ey++
  Kaladp0055s0184.1.p  98 KREINV--GDVTAVRYTLSFMketndeqagassekTKKKKKMASTHWNMVEYKV 149
                          ****99..8899*********77777666666554367778889********86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.1E-173170IPR003441NAC domain
PROSITE profilePS5100520.7677170IPR003441NAC domain
PfamPF023651.5E-99148IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    Send to blast
MMMSEEWCPG RVFNPAEEEI VGFYLKLAAT GMPLPPFVES AVRRVDVYGN QAPWEIFAEE  60
LGRGSRVFFA ITRLVKRSKG RMSRVVGGGG TWKGQSVKRE INVGDVTAVR YTLSFMKETN  120
DEQAGASSEK TKKKKKMAST HWNMVEYKVS SFSGEGDLDQ NVVFCRLTYS GPRHQSSPVP  180
SSASSSAVGG SKRGRREGDE SISSRPRKRV TQEQQQDDGG VTTYSVLNHQ AGEGVGENDD  240
DAMALYVGTA NGHGEAADGN DDEYLHLLNF DVAVVDDNDG GLSNNTTEEP VQWSTTTQPV  300
PTALELQEVE NVDWTHINMK SNGGVIGSED DGYLDIINFD VAMGDNDGGL SNNATEEKQQ  360
EDPDQQSTIT IAQGRSGQFG CPVQSKLLRP FETRTAE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.25e-09NAC domain containing protein 41