PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0053s0021.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 273aa    MW: 29689.8 Da    PI: 8.2283
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0053s0021.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1728.9e-23128190163
                          XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                          e++lk errkq+NRe+ArrsR+RK+ae+eeL+ kv++L aeN++Lk+e+++l k+++klk e+
  Kaladp0053s0021.1.p 128 ERQLKQERRKQSNRESARRSRLRKQAETEELAAKVDVLMAENMTLKSEINQLIKNSEKLKFEN 190
                          799********************************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1705.0E-15126188No hitNo description
PfamPF001709.3E-21128190IPR004827Basic-leucine zipper domain
SMARTSM003389.9E-19128192IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.449130193IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.56E-11131187No hitNo description
CDDcd147022.07E-15133179No hitNo description
PROSITE patternPS000360135150IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
IPGKTSGNTT GGSRDSESGD SGGSSGGSRE KTSADEQSHR KRKCEQSVDI EKTVKIEIQA  60
NSIVPVDTNR ESSKVAGIAV GPAANGKLEN VTVLDLDMKP NHIVNSKMSF DAQQSGSKLS  120
SEACFQSERQ LKQERRKQSN RESARRSRLR KQAETEELAA KVDVLMAENM TLKSEINQLI  180
KNSEKLKFEN ARMMEKLKNA KTEETERIGF NNADDSRSQT LSTENLLSRV NNSGSVVTPE  240
EEGELHGNNN SNPTKLRQLL DASPRADAVA AS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144150RRSRLRK
2144151RRSRLRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019081300.13e-67PREDICTED: common plant regulatory factor 1 isoform X2
RefseqXP_019081301.13e-67PREDICTED: common plant regulatory factor 1 isoform X2
TrEMBLA0A438JM421e-65A0A438JM42_VITVI; Common plant regulatory factor 1
TrEMBLD7UCK31e-65D7UCK3_VITVI; Uncharacterized protein
STRINGVIT_15s0046g01440.t012e-66(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.15e-38G-box binding factor 3