PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0250.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 364aa    MW: 40646.8 Da    PI: 6.6104
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0250.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.64.6e-1275107234
                          XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                          +++k++rr+++NReAAr+sR+RKka++++Le+ 
  Kaladp0050s0250.1.p  75 PADKVQRRLAQNREAARKSRLRKKAYVQQLETS 107
                          689***************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-873123No hitNo description
SMARTSM003387.6E-974145IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.87576120IPR004827Basic-leucine zipper domain
PfamPF001701.1E-876107IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.71E-778123No hitNo description
PROSITE patternPS0003608196IPR004827Basic-leucine zipper domain
PfamPF141444.3E-31166239IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MQSPASHFLP MTGMGMYDPV NHIGTWAENF KGNGFTITSP STILEVNTKL DNQSEDTSNG  60
TFGHATNYDE ETTKPADKVQ RRLAQNREAA RKSRLRKKAY VQQLETSRLR LLQLEQELHQ  120
TRQQGFNAGG GLGASHSGFS GAVNSGITTF QMEYGRWVEK NNKQVIELRN ALNSYQSDAD  180
LETLVDNVMK HYFELFQMKQ TAAKADVFYL MSGMWKTTAE RFFLWIGGFR PSELLKVLVP  240
QLDPLAENQL LDICNLRRSC QQAEDALSQG LDKLQEIVVD TLAAGGQMDE GSSIPQIAAT  300
MDKLGDLVSF VNQADHLRKE TLNQMSHILT THQTARGLLA LGDYLERLRA LSSLWAARQR  360
EAA*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007048077.10.0PREDICTED: transcription factor TGA1
RefseqXP_017983090.10.0PREDICTED: transcription factor TGA1
RefseqXP_021275232.10.0transcription factor TGA1-like
RefseqXP_021275233.10.0transcription factor TGA1-like
RefseqXP_021275234.10.0transcription factor TGA1-like
RefseqXP_021275235.10.0transcription factor TGA1-like
SwissprotQ391621e-167TGA4_ARATH; Transcription factor TGA4
TrEMBLA0A061DI740.0A0A061DI74_THECC; BZIP transcription factor family protein isoform 1
STRINGEOX922340.0(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10030.21e-153TGACG motif-binding factor 4
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Canales J,Contreras-López O,Álvarez JM,Gutiérrez RA
    Nitrate induction of root hair density is mediated by TGA1/TGA4 and CPC transcription factors in Arabidopsis thaliana.
    Plant J., 2017. 92(2): p. 305-316
    [PMID:28771873]