PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0050s0021.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 413aa MW: 45092.4 Da PI: 6.7097 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 52.1 | 1.4e-16 | 203 | 262 | 3 | 62 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 + kr rr+ +NRe+ArrsR+RK+a + Le+ v++L eN++L ++l+ ++++ +++ + Kaladp0050s0021.4.p 203 DAKRVRRMLSNRESARRSRRRKQAHLTDLETQVAQLRVENSSLTNRLNDISQKFDEVSVD 262 689*****************************************9999999988776655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.4E-13 | 199 | 257 | No hit | No description |
SMART | SM00338 | 4.8E-18 | 201 | 265 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.691 | 203 | 266 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 9.3E-14 | 204 | 257 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.3E-12 | 205 | 254 | No hit | No description |
CDD | cd14702 | 2.83E-6 | 206 | 257 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 208 | 223 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 1.2E-35 | 272 | 402 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071333 | Biological Process | cellular response to glucose stimulus | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0042802 | Molecular Function | identical protein binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 413 aa Download sequence Send to blast |
MDRVFSVEGI ADHFWTSPPP SQLVNHSNAD ASPSNTTMNR SSSEWAFQLF IQENTHSPAA 60 TKLHDDQDVV EIKDHPAAPP NVPIDSDEYQ AFLKTRLDLA CAAVAMTRAS TGKPQDSSTS 120 TDSGTKALNA SQVRSHVNKK GSGSDSSKRK NKDGPLGNPT LPAKPSKHVV QVKSTTSGSS 180 RELSDDDELE GVTEMTGDMD HTDAKRVRRM LSNRESARRS RRRKQAHLTD LETQVAQLRV 240 ENSSLTNRLN DISQKFDEVS VDNRVLKADV ETLRAKVKMA EETVKRVTGQ SPMFQTMSET 300 STFNTQSYDG DNSDISTDAA VPIQDDRSDH IYQQHASNPL TATPLHDPRV TNSLSNNSST 360 ENACPNSSAA ETITLSGNKT GRMSSMQRVA SLEHLQKRIR GNSSATQCNG EQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 217 | 224 | RRSRRRKQ |
2 | 219 | 224 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00040 | PBM | Transfer from AT5G28770 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006347748.1 | 1e-143 | PREDICTED: light-inducible protein CPRF2 | ||||
Swissprot | Q99090 | 1e-120 | CPRF2_PETCR; Light-inducible protein CPRF2 | ||||
TrEMBL | A0A1S4CER8 | 1e-142 | A0A1S4CER8_TOBAC; light-inducible protein CPRF2-like | ||||
STRING | PGSC0003DMT400050096 | 1e-142 | (Solanum tuberosum) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.2 | 6e-70 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0050s0021.4.p |
Publications ? help Back to Top | |||
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