PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0575.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 501aa    MW: 55295.2 Da    PI: 6.7777
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0575.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.25.9e-31107160255
              G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                          prlrWtp+LH +Fv+ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ++R+
  Kaladp0048s0575.1.p 107 PRLRWTPDLHMCFVHAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMHRS 160
                          8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.784103163IPR017930Myb domain
Gene3DG3DSA:1.10.10.609.4E-30103161IPR009057Homeodomain-like
SuperFamilySSF466895.91E-14105161IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-21107162IPR006447Myb domain, plants
PfamPF002494.4E-8108159IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 501 aa     Download sequence    Send to blast
MASSAETPTF VAIEIISDDE NLSGRSSSQQ SAKAEHHPTL RKSSSVLDLN ERAKGDVEEE  60
NQIGDCDDQF DEEGNSTSSN NDDDREDEKK RNNGTNTVRQ YVRSKMPRLR WTPDLHMCFV  120
HAVERLGGQE RATPKLVLQL MNVKGLSIAH VKSHLQMHRS KKLDESGQVL SHHQNGPAGH  180
GKHHHQMMEM TYQQRGLHTS SHHPYAYPHF KIDHSNRSGG SSSINHVTFP LFKPSLNSPR  240
NQSWPMTGHP MARWSKDLGL APGYPPSHEP RSASPKHFGP IRQSHFLERR WPASGVGLGS  300
EDRQRCRNAS TSHNAAYDWD KSHHPGYHLN LGNVLSLGNS QIASTSTMLT TTTTLASKEV  360
SNSSPTLSMS TSSDRELGAP FHLKLLQRLE EERISSMEDM MVADEEKLDG EVERIRSCQP  420
NLQLSLSHTD ETGKKPSGDG GLGSSSVDTA LSLSISLSAP AAVGVEEELT VEKCEGGDIG  480
EEIRRWGSCE MVRSKATIWG *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A2e-16108162458Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B2e-16108162458Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A2e-16108162357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-16108162357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-16108162357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-16108162357Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A2e-16108162458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C2e-16108162458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D2e-16108162458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F2e-16108162458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H2e-16108162458Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J2e-16108162458Protein PHOSPHATE STARVATION RESPONSE 1
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00297DAPTransfer from AT2G38300Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.12e-36G2-like family protein