PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0085.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Nin-like
Protein Properties Length: 271aa    MW: 30692.7 Da    PI: 7.9843
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0085.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK71.21.4e-2281128552
               RWP-RK   5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                          ++ e +skyF++pi+ AA eL+++lT+ K++CR++G+ RWPhRk+ s+
  Kaladp0048s0085.1.p  81 LTWEIISKYFYMPIARAAEELNIGLTLFKKRCRELGVGRWPHRKLMSI 128
                          78899****************************************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151916.40457149IPR003035RWP-RK domain
PfamPF020424.8E-1981128IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MDSYHTGRLN SDPLYASLNI IDHHFPDDFH GMDKFGNQQS WARDHRRVPT APERSDRKSS  60
RKMRDNCKSA TESNNSVAEF LTWEIISKYF YMPIARAAEE LNIGLTLFKK RCRELGVGRW  120
PHRKLMSIKS LIKNEMEEGG VNNRAVEKAT IRSAIQELES QRKMMEAMPE VELEAQTKRL  180
RQACFKANYK KRRLMIMSNE ALADSNGSVS SSKDRESTTS SMANVSFSSS SMPGRDVGAL  240
ACGLEESDEL QSLLFDALSP SEWSFLSDFI *
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor. {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
SwissprotQ9M9U92e-39RKD1_ARATH; Protein RKD1
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.12e-41RWP-RK domain-containing protein