PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0047s0150.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 359aa MW: 40217.9 Da PI: 8.8412 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 24.6 | 5.6e-08 | 231 | 277 | 17 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 A+rsR RK+++i+eLe+ v++Lea ++ ele l+k+ l +e+ Kaladp0047s0150.1.p 231 AQRSRVRKLQYIAELEKNVQALEADGSEVSAELEFLNKQNLILGMEN 277 89************************************998888877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 0.0015 | 220 | 279 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 1.10E-14 | 221 | 270 | No hit | No description |
SuperFamily | SSF57959 | 1.69E-5 | 224 | 277 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 9.3E-6 | 231 | 271 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 359 aa Download sequence Send to blast |
MANTKGATNL RSLNYTGKHS LLPPKSPLPS IPHAYTDYNP IPVVGPRAIQ RPKQGPNLHQ 60 RTSSESVALE EQPSWLDELL NEPDTPVRKG GHRRSSSDSF AYLDVADAAN REYPVNDHRF 120 NNMPPIPTWA SQDLDPLRDS RPFYGDMNSV AKQNNKVWGS SLSPSAQLRD HLVLQNPVIA 180 QDVNLASLTA SEKQDGGEYF ISEAKLSEKI DHSAKPGASE ADTKRAKQQF AQRSRVRKLQ 240 YIAELEKNVQ ALEADGSEVS AELEFLNKQN LILGMENKAL KQRLDSLAQE QLIKCLEQEV 300 LEREIGRLRA LYQQQQLQPQ QQQQTPARHR RSNSRELDSQ FANLSLKQKD TNSSKALS* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012071280.1 | 1e-140 | uncharacterized protein At4g06598 | ||||
Refseq | XP_020534676.1 | 1e-140 | uncharacterized protein At4g06598 | ||||
TrEMBL | A0A067KV23 | 1e-139 | A0A067KV23_JATCU; Uncharacterized protein | ||||
STRING | cassava4.1_009724m | 1e-138 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G58110.2 | 5e-88 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0047s0150.1.p |