PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0045s0413.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 306aa MW: 33175 Da PI: 9.3499 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 122 | 2e-38 | 79 | 138 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+alkcprC s+ntkfCyynnys sqPryfCk+CrryWt+GGalrnvPvGgg+r+nk+ s Kaladp0045s0413.1.p 79 ETALKCPRCASMNTKFCYYNNYSHSQPRYFCKTCRRYWTQGGALRNVPVGGGCRRNKRYS 138 6789*****************************************************976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 1.0E-32 | 62 | 136 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 1.0E-32 | 81 | 136 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.938 | 82 | 136 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 84 | 120 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 306 aa Download sequence Send to blast |
MIFSSMPNYN LNPTSNLNHQ QVNHQQLGSS AEGPHPQPPH TPILPNSPPP QQPAIHYQGT 60 IRPGSMTDRA RMANMPIPET ALKCPRCASM NTKFCYYNNY SHSQPRYFCK TCRRYWTQGG 120 ALRNVPVGGG CRRNKRYSSK VGGGGSSGTA RSKSPAHSGS TPSNSIGYSS GELIRHGSHI 180 HPRNSFMAPL NLHFSDYSAE DIGVSCPGMI PRVSSSADHF NLLTGNGNTA TSSSETDPWT 240 FIHQHQLAQV YHHPSSFGGN LEAPLTETPS LYGVEGHVNA SQPTKNKLPC TADTQLNLLK 300 LEKGI* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G02460.1 | 2e-42 | Dof family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0045s0413.1.p |