PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0042s0376.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GRF
Protein Properties Length: 494aa    MW: 53775.7 Da    PI: 7.5888
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0042s0376.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC71.41.1e-22155198144
                  WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                          d+ep+rCrRtDGKkWRCsr+v +++k+CErH h++r rsrk++e
  Kaladp0042s0376.1.p 155 DQEPWRCRRTDGKKWRCSRDVAPDQKYCERHAHKNRPRSRKHVE 198
                          68****************************************97 PP
2QLQ47.74.8e-1796129235
                  QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqai 35 
                          +FT aQ+q+L++Q  +yK L+a+ PvPp+Ll++i
  Kaladp0042s0376.1.p  96 SFTKAQWQELERQTVVYKFLSASIPVPPQLLMPI 129
                          6********************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009511.2E-1095131IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088804.5E-1396129IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166620.10896131IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.374155199IPR014977WRC domain
PfamPF088791.4E-18157198IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0009941Cellular Componentchloroplast envelope
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 494 aa     Download sequence    Send to blast
MGSDKQAAEC DVGLGLRIQQ MTPSMPLRQQ QQQLTSPGFG AGGGGLFDGS AFFRQGGNHA  60
ADDAYNIVGA ETRNTMNYFN SDLPFQSQVP TRGPFSFTKA QWQELERQTV VYKFLSASIP  120
VPPQLLMPIN GTQINLAVSH PNRLLNFGLP SNGTDQEPWR CRRTDGKKWR CSRDVAPDQK  180
YCERHAHKNR PRSRKHVELH TPNLTSAPST STGNKKNHQL DLKVSSKSVE PRSHIFNQNG  240
PQLSSYPTLA SYDQPRCSFD WFGKGNTTSG DRGSQLWTPI MQPEEGLAGS QSNNFFKHVS  300
TCKRQKETPM SSNGLGMNLG AQGHNQNDPC GLLLGPKLAF LNDDLNLEQT EMPRGFIDAW  360
STADGGDSVC KVSHKFSDPS NKTHPISSLT LSMSGGNDAN AEERHEHLGI GLMDAEQDSS  420
GLKLQQPMVN WMSTEPWMGS TPGGPLAEAL CLGISSNLKS VNAHQPSSPY GCSSNTANTK  480
QQSSSDESSS HGL*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002272535.38e-92PREDICTED: growth-regulating factor 8
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24150.12e-34growth-regulating factor 8