PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0040s0592.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Nin-like

Protein Properties

Length: 909aa MW: 99895.1 Da PI: 6.3218

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0040s0592.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	88.9	4.2e-28	589	640	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+le+l+++Fs+++kdAAk+Lgvc+T+LKriCR+ GIkRWP+Rkik++ Kaladp0040s0592.1.p 589 AEKTITLEVLQRHFSGSLKDAAKSLGVCPTTLKRICRNQGIKRWPSRKIKKV 640 589***********************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	16.893	579	660	IPR003035	RWP-RK domain
Pfam	PF02042	3.4E-25	592	640	IPR003035	RWP-RK domain
SuperFamily	SSF54277	3.27E-23	808	898	No hit	No description
SMART	SM00666	3.4E-24	811	894	IPR000270	PB1 domain
PROSITE profile	PS51745	24.337	811	894	IPR000270	PB1 domain
Gene3D	G3DSA:3.10.20.240	1.8E-22	812	891	No hit	No description
Pfam	PF00564	2.6E-17	813	892	IPR000270	PB1 domain
CDD	cd06407	1.35E-37	813	893	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0005515	Molecular Function	protein binding

Sequence ? help Back to Top
Protein Sequence Length: 909 aa Download sequence Send to blast
MDDGNLSPAA IHGPSFASDM DFDYMNELLG DGCWLETVQG SDFLPQCPSD SNNLLNSPFH 60 LWSPSDTFLG ENIFGQPEES SQERSSLPGG ASLVESQKGT SAKIEKPEQE LGSLAGCSSQ 120 PSYRIDEAES GKRWWIGPRA TAGPKISVME RLVRAISYIK DSSKDRDVLI QIWVPMDLNG 180 KRVLTTNDQP YIVDSSSSSL ASYRSISLNF QFSAEKDSNM TEGMPGRVFL DKVPEWTPDV 240 RFFRSDEYAR VGYAQTFNVR GTLALPVFER GSQTCLGVIE VVTTKQKVKA ELDSVCQALQ 300 AVDLSSTESQ SNDKAKKCIQ SYHAALPEIL EVMKSACLTH KLPLAQTWMP CVQQGKEGCR 360 HTIENYAHCV STVDSACYVA DPNVQGFQEA CSEHHLLRGQ GVAGKAFTTN EPCFFDDITS 420 FCKTEYPLSH HARMFRLHAA VAIRLRSVRT GAADFVLEFF LPADCREPED QKKMLASLSL 480 IIQETCNSLR VVTDDELAKD AITSMSASVE GVGAPMTNNE MSTRYGSVID QSRNVAPFIQ 540 KEEPGEFNYG RFAVIQSNLP GSSSLDYNTF GEGNFKDFDR AGDKKRTKAE KTITLEVLQR 600 HFSGSLKDAA KSLGVCPTTL KRICRNQGIK RWPSRKIKKV GHSLEKLQRV IDSVQGPSGT 660 FQIGSFYSNF PELASPSCKS GITNQFSASK LSTLPKSSTL QLEGNASSPP STSLSPSSSC 720 SQSSSSSHSC SSGRLDKTSS GNSTRSQDAA VKEKADEGVL KRMRSDAQLN EKGHDDPKLL 780 PRSRSHVTLC GTPDNESLPP LQKISVKESD GTRVKVTYGD DKIRIRMQNH WQLQDLRQEI 840 ARRFHVEGSS EMQLKYLDDD SEWVLLTCDA DWEECVDLCL SASSNTIKLS LHAPPHHLGS 900 SLVSSSPP*

Sequence ? help Back to Top

Protein Sequence Length: 909 aa Download sequence Send to blast

MDDGNLSPAA IHGPSFASDM DFDYMNELLG DGCWLETVQG SDFLPQCPSD SNNLLNSPFH  60
LWSPSDTFLG ENIFGQPEES SQERSSLPGG ASLVESQKGT SAKIEKPEQE LGSLAGCSSQ  120
PSYRIDEAES GKRWWIGPRA TAGPKISVME RLVRAISYIK DSSKDRDVLI QIWVPMDLNG  180
KRVLTTNDQP YIVDSSSSSL ASYRSISLNF QFSAEKDSNM TEGMPGRVFL DKVPEWTPDV  240
RFFRSDEYAR VGYAQTFNVR GTLALPVFER GSQTCLGVIE VVTTKQKVKA ELDSVCQALQ  300
AVDLSSTESQ SNDKAKKCIQ SYHAALPEIL EVMKSACLTH KLPLAQTWMP CVQQGKEGCR  360
HTIENYAHCV STVDSACYVA DPNVQGFQEA CSEHHLLRGQ GVAGKAFTTN EPCFFDDITS  420
FCKTEYPLSH HARMFRLHAA VAIRLRSVRT GAADFVLEFF LPADCREPED QKKMLASLSL  480
IIQETCNSLR VVTDDELAKD AITSMSASVE GVGAPMTNNE MSTRYGSVID QSRNVAPFIQ  540
KEEPGEFNYG RFAVIQSNLP GSSSLDYNTF GEGNFKDFDR AGDKKRTKAE KTITLEVLQR  600
HFSGSLKDAA KSLGVCPTTL KRICRNQGIK RWPSRKIKKV GHSLEKLQRV IDSVQGPSGT  660
FQIGSFYSNF PELASPSCKS GITNQFSASK LSTLPKSSTL QLEGNASSPP STSLSPSSSC  720
SQSSSSSHSC SSGRLDKTSS GNSTRSQDAA VKEKADEGVL KRMRSDAQLN EKGHDDPKLL  780
PRSRSHVTLC GTPDNESLPP LQKISVKESD GTRVKVTYGD DKIRIRMQNH WQLQDLRQEI  840
ARRFHVEGSS EMQLKYLDDD SEWVLLTCDA DWEECVDLCL SASSNTIKLS LHAPPHHLGS  900
SLVSSSPP*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010663967.1	0.0	PREDICTED: protein NLP4
Refseq	XP_010663969.1	0.0	PREDICTED: protein NLP4
TrEMBL	A0A438ETN8	0.0	A0A438ETN8_VITVI; Protein NLP2
STRING	EOY15260	0.0	(Theobroma cacao)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Phytozome	Kaladp0040s0592.1.p