PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0037s0380.2.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 330aa    MW: 36915.4 Da    PI: 8.9443
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0037s0380.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.32.2e-104484545
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                         k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Kaladp0037s0380.2.p 44 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 84
                         788*************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-840103IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4154286IPR004827Basic-leucine zipper domain
PfamPF001704.9E-74484IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.92E-74487No hitNo description
CDDcd147082.01E-214496No hitNo description
Gene3DG3DSA:1.20.5.1709.9E-84589No hitNo description
PROSITE patternPS0003604762IPR004827Basic-leucine zipper domain
PfamPF141442.7E-32126201IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    Send to blast
MADVSQGTDT STDVDTEEKN QRFDMVLSTG NSSDRSKDKP GDQKTLRRLA QNREAARKSR  60
LRKKAYVQQL ESSRLKLTQL EQELQRARQQ GIFISSSGDH THSMSGNGAL AFDAEYSRWL  120
EEHNKQINEL RAAVNSHAGD TELRTIVDNV TTHYDDIFRL KGTAAKADVF HILSGMWKTP  180
AERCFLWIGG FRSSELLKLL VNQLEPLTEQ QLLAIYNLQQ SSQQAEDALS QGMEALQQSL  240
AETLASASPS PSGNSGNVAN YMGQMAMAMG KLGTLEGFLR QADNLRQQTL QQMHKILTTR  300
QSARALLTIH DYFSRLRALS SLWLARPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_026413851.10.0transcription factor TGAL1-like
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A0D2PJG40.0A0A0D2PJG4_GOSRA; Uncharacterized protein
TrEMBLA0A0D2TRW40.0A0A0D2TRW4_GOSRA; Uncharacterized protein
STRINGGorai.007G352600.10.0(Gossypium raimondii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-155TGACG motif-binding factor 6