PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0036s0171.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 573aa MW: 62856 Da PI: 6.8958

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0036s0171.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.00047	458	490	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++++ L++++ + +K + a++L++A+ YIk q Kaladp0036s0171.1.p 458 EKISALQQIVSPY-----GKTDTASVLQEAIGYIKFHQ 490 5789999999988.....9****************876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	2.36E-8	458	502	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	3.28E-4	458	494	No hit	No description
Gene3D	G3DSA:4.10.280.10	1.9E-6	458	507	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 573 aa Download sequence Send to blast
MADQDCNNIN LLPLALSSSP SSWWDLHHHA TPTPSITSWN NTSTAAAAAA ASLWENHNHS 60 NSSPCDQEDV SISVSNHSSL TVDDSSHRLV EPSASSSNNI IGQPTTENNS HLWSQLLLGV 120 GGSQEMHDEM GENLLNALSL KNFSGGMFEP SACSDYLKKF DSHQHEKWAD SNGDQFRNSN 180 PATAANSSFT RNFDNTNVGY NGDTNLAENN DDQRSLIKLS SSNLVNSWSI APPDLSQMTF 240 HHLVPNPCNN NILPSIDQYL HPDITGDQTK QNLSYQPQLL DMAPNSIYDC ASYGVSQTRS 300 GNDHYEESDQ VGSSQASLFP KVFINNFESI YGSTGGNWRP RESSIHSQHG FTPSVIDPFS 360 NSRSRSLSKP LLKSLSLLDT RKQQGTNLTN SLINNKSNGR GQGASANDGK KKRSQEASQS 420 SGSSSRKPKR ESNSYNPSTA SSFTKTTTQT PKVKIAAEKI SALQQIVSPY GKTDTASVLQ 480 EAIGYIKFHQ EQVQLLSNPY LKSNVNKLQT CMMQEAWGSL DRKYEKGEKN KLKVVDLKSK 540 GLCLVPTSSI PQVYKDNSGP DYWPTYRGCL YR*

Sequence ? help Back to Top

Protein Sequence Length: 573 aa Download sequence Send to blast

MADQDCNNIN LLPLALSSSP SSWWDLHHHA TPTPSITSWN NTSTAAAAAA ASLWENHNHS  60
NSSPCDQEDV SISVSNHSSL TVDDSSHRLV EPSASSSNNI IGQPTTENNS HLWSQLLLGV  120
GGSQEMHDEM GENLLNALSL KNFSGGMFEP SACSDYLKKF DSHQHEKWAD SNGDQFRNSN  180
PATAANSSFT RNFDNTNVGY NGDTNLAENN DDQRSLIKLS SSNLVNSWSI APPDLSQMTF  240
HHLVPNPCNN NILPSIDQYL HPDITGDQTK QNLSYQPQLL DMAPNSIYDC ASYGVSQTRS  300
GNDHYEESDQ VGSSQASLFP KVFINNFESI YGSTGGNWRP RESSIHSQHG FTPSVIDPFS  360
NSRSRSLSKP LLKSLSLLDT RKQQGTNLTN SLINNKSNGR GQGASANDGK KKRSQEASQS  420
SGSSSRKPKR ESNSYNPSTA SSFTKTTTQT PKVKIAAEKI SALQQIVSPY GKTDTASVLQ  480
EAIGYIKFHQ EQVQLLSNPY LKSNVNKLQT CMMQEAWGSL DRKYEKGEKN KLKVVDLKSK  540
GLCLVPTSSI PQVYKDNSGP DYWPTYRGCL YR*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	5e-37	bHLH family protein

Link Out ? help Back to Top
Phytozome	Kaladp0036s0171.1.p