PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0035s0090.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 306aa    MW: 33903 Da    PI: 10.0862
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0035s0090.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like33.59.5e-11216240226
              G2-like   2 prlrWtpeLHerFveaveqLGGsek 26 
                          pr+rWt+ LH++Fv+ave LGG+e 
  Kaladp0035s0090.1.p 216 PRMRWTNSLHASFVHAVELLGGHET 240
                          9*********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.0E-8214241IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    Send to blast
MPINSPRNTE MVAPDLDLHI CLPNMVASPS SLSSASLYCH EEPDTELSLL PNSSSETDKW  60
SRQQQQQKPS SLNTLGLDEA SKTHNKQSLR FCPSFRSVRQ AITANNTYQQ YVSGEGRNSK  120
LIKGIPVYNQ SSSASSLCSN NPNFGGALRL NGMPMEAIRK QQPQFRYCSS SHQYSGIAEQ  180
SSHSSIGVPE VNGDIVFRPR FMLPKIQDRR NNVRAPRMRW TNSLHASFVH AVELLGGHET  240
TRLSSSRARV LKKTFEPSSS IDFLGSSSTS RIRAEYISNR AELEQANTRL GSARLQLLTT  300
SRNTV*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.12e-12G2-like family protein