PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0031s0037.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 212aa    MW: 23129 Da    PI: 6.627
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0031s0037.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.77.8e-202876355
                  AP2  3 ykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                         ++GVr ++ +gr++AeIrd ++    ++r++lg+f+ta+eAa+a++aa+++++g
  Kaladp0031s0037.1.p 28 FRGVRKRP-WGRYAAEIRDpFK----KTRVWLGTFDTADEAARAYDAAARSFRG 76
                         8*******.**********662....5************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.85E-202784No hitNo description
PfamPF008472.6E-132776IPR001471AP2/ERF domain
PROSITE profilePS5103223.6442784IPR001471AP2/ERF domain
SMARTSM003803.2E-372790IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-312884IPR001471AP2/ERF domain
PRINTSPR003677.8E-112839IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-222885IPR016177DNA-binding domain
PRINTSPR003677.8E-115066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    Send to blast
MRKVKVAAVA GHDQAGPEMR DPESEIRFRG VRKRPWGRYA AEIRDPFKKT RVWLGTFDTA  60
DEAARAYDAA ARSFRGPKAR TNFPFPSSPP LHPPVTLNPL PPPPLSYHNP AHMFSAQYIH  120
RPASSSMSST VETFSGPKLS NPLAALPSTR VLFHQPVPEE GPDCHSDCDS SSSVVNFEEG  180
GAWGVPDLNL PPPMDDADMN CDDLDATALR L*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A1e-2027841472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022947976.15e-47ethylene-responsive transcription factor 3-like
RefseqXP_022970780.15e-47ethylene-responsive transcription factor 3-like
RefseqXP_022970781.15e-47ethylene-responsive transcription factor 3-like
RefseqXP_023534086.15e-47ethylene-responsive transcription factor 3-like
TrEMBLA0A0V0HV087e-48A0A0V0HV08_SOLCH; Putative ethylene-responsive transcription factor 3-like
STRINGXP_008456400.12e-45(Cucumis melo)
STRINGXP_004143195.12e-45(Cucumis sativus)
STRINGXP_004172004.12e-45(Cucumis sativus)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28370.19e-22ERF domain protein 11