PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0030s0117.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NAC | ||||||||
Protein Properties | Length: 286aa MW: 33048.4 Da PI: 6.6291 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 166.8 | 7.5e-52 | 7 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 lp+GfrFhPtdeelv++yL +++e++++ + +i+e+d+yk++Pw+Lp+ + +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk Kaladp0030s0117.1.p 7 LPAGFRFHPTDEELVMHYLVRRCESQPIAV-PIIREIDLYKFDPWQLPELALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADK 95 799*************************99.88***************7656689*********************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ ++vg+kk Lvfy g+apkg+kt+W+mheyrl Kaladp0030s0117.1.p 96 PICK--PQTVGIKKALVFYAGKAPKGVKTNWIMHEYRL 131 **99..789***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.11E-62 | 4 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.531 | 7 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.8E-27 | 8 | 131 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 286 aa Download sequence Send to blast |
MTVGLNLPAG FRFHPTDEEL VMHYLVRRCE SQPIAVPIIR EIDLYKFDPW QLPELALYGE 60 KEWYFFSPRD RKYPNGSRPN RAAGTGYWKA TGADKPICKP QTVGIKKALV FYAGKAPKGV 120 KTNWIMHEYR LANVDRSARK RNNNLRLDDW VLCRIYNKKG KIEKTMTSNQ ASFEHEVEDE 180 KPRIHLPDPK MEIESPQTHL PNTSDSDPRS TCSDHASSPD VTCEREVQSE PKLNDLDKFF 240 DYSFDFVEDP FQTTGPLSDP AQFEAQYAFS NPLQDMFMYM QQRPL* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 1e-79 | 5 | 164 | 13 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020220700.1 | 1e-134 | NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 1e-113 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A151T497 | 1e-133 | A0A151T497_CAJCA; NAC domain-containing protein 2 | ||||
STRING | GLYMA04G38560.1 | 1e-128 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-116 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0030s0117.1.p |