PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0029s0050.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HB-other
Protein Properties Length: 350aa    MW: 39187.7 Da    PI: 4.4905
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0029s0050.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox28.42.7e-09280327653
                          S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHH CS
             Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRa 53 
                          +++k q+++Le+++++++ p+ +++  + + ++L+ ++V  WF  +R 
  Kaladp0029s0050.1.p 280 RLKKVQVDTLERVYRRTKRPTNTMISSIVHVTNLPRKKVVKWFEDKRS 327
                          67899***************************************9996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500719.556272332IPR001356Homeobox domain
SuperFamilySSF466894.06E-9274339IPR009057Homeodomain-like
CDDcd000866.62E-6275326No hitNo description
SMARTSM003894.0E-4278336IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.608.1E-8279328IPR009057Homeodomain-like
PfamPF000467.5E-7280327IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002229Biological Processdefense response to oomycetes
GO:0009414Biological Processresponse to water deprivation
GO:0009682Biological Processinduced systemic resistance
GO:0009787Biological Processregulation of abscisic acid-activated signaling pathway
GO:0010118Biological Processstomatal movement
GO:0050832Biological Processdefense response to fungus
GO:2000022Biological Processregulation of jasmonic acid mediated signaling pathway
GO:2000071Biological Processregulation of defense response by callose deposition
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MASVSSVNVS ASFRSASTVS SYCSRLGVHA KVSSQNQRLQ TSASSARSIA AFARRRKSYS  60
VINSSSSSNN KKNVSKDVVQ EEDVDEDAFE ALFAQLEEDL KNDPSIEDED GELTEEELAK  120
LESELEEAMM EDDDFFKMLN ATAGGTENDG DGDEDEEGEE DEEEEEDVEE DKSVKLKNWQ  180
LRRLARALKV GRRKTSIKSL AAELCLERPL VLEMLGNPPP KLLMMSAMLP DESVQPAMTE  240
SLATPVEVVE TVPEEKIVVL DTDKKVPIHA MQSQWSSQKR LKKVQVDTLE RVYRRTKRPT  300
NTMISSIVHV TNLPRKKVVK WFEDKRSEDG VPTERLPYER STTETVFSS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010648647.11e-108PREDICTED: protein OVEREXPRESSOR OF CATIONIC PEROXIDASE 3
TrEMBLF6H3091e-109F6H309_VITVI; Uncharacterized protein
STRINGVIT_04s0008g05190.t011e-110(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11270.11e-62overexpressor of cationic peroxidase 3