PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0028s0045.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 302aa    MW: 34247.6 Da    PI: 7.5046
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0028s0045.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like993.2e-31170225156
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                          k+r++W+ eLH+rFv+a++qLGG e+AtPk+i+++m v+gLt+++vkSHLQkYRl+
  Kaladp0028s0045.1.p 170 KQRRCWSLELHQRFVDALKQLGGFEVATPKQIRDIMRVEGLTNDEVKSHLQKYRLH 225
                          79****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466894.66E-16168228IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.2E-27169228IPR009057Homeodomain-like
PROSITE profilePS512949.309169227IPR017930Myb domain
TIGRFAMsTIGR015575.2E-25170225IPR006447Myb domain, plants
PfamPF002496.0E-6172223IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MDPDPTHDFL KIAPPVDDPP RRKLQGLADY LAGLEAERRK VEAFERELPL CLGLLNDAVE  60
RFREELRKCR EAVDRSFDKV RGPNSENDDD DRKNWMSSVQ LWNPHPDDSS EFNSSSSNLD  120
LMIGGCFGDG ISLVRLCGEN VRNPGKALIN ESKMQKRIQH QQAQQLVCRK QRRCWSLELH  180
QRFVDALKQL GGFEVATPKQ IRDIMRVEGL TNDEVKSHLQ KYRLHFRKAP STPMPATSNG  240
PTASRDDQLS TRLHSKSHSM YSPQGPLGRS SAMLDEGGDD ENEGHSWRNR VIFRPACMPT  300
C*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37180.17e-46G2-like family protein