PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0024s0187.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 385aa MW: 41532.1 Da PI: 7.5811 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 104 | 9.1e-33 | 194 | 249 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rF++a++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Kaladp0024s0187.1.p 194 KQRRCWSPELHRRFIHALQQLGGPHVATPKQIKELMKVDGLTNDEVKSHLQKYRLH 249 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.88E-18 | 191 | 252 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 15.314 | 191 | 251 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.1E-28 | 191 | 252 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.1E-27 | 194 | 249 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 6.1E-8 | 196 | 247 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 385 aa Download sequence Send to blast |
MDYAEKMQKC SEYVEALEVE RRKIQVFQRE LPLCLELVSQ AIDACRQQLS SASPPHAAAV 60 GVSHECFHVR QQSECSEQTS SHGPVLEEFI PIKRAASCSS EDVGEEEEDE SGEKSGDKSG 120 KKSDWLRSVQ LWNQSPDPAP VCEVKKNGGA FRPFNKEKAV VVAEMVDKPA SSTTVKSRKE 180 ESAKEKESGQ TQRKQRRCWS PELHRRFIHA LQQLGGPHVA TPKQIKELMK VDGLTNDEVK 240 SHLQKYRLHM RRPSATMAST ANAQGPQFVV VGGIWVPPPE YAAPAMTPAA TTSSGDPPEA 300 DNGKREARTP SNGVYAPVAT VGTPFARPAS RTQNSNQKVQ SGSHCEDDNG SHSAHGGARA 360 HSGSPASSSS THTTATATAS PASS* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00160 | DAP | Transfer from AT1G25550 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003631224.1 | 1e-128 | PREDICTED: myb family transcription factor EFM | ||||
Swissprot | Q9FPE8 | 1e-102 | HHO3_ARATH; Transcription factor HHO3 | ||||
TrEMBL | A0A438ECN5 | 1e-127 | A0A438ECN5_VITVI; Transcription factor HHO3 | ||||
STRING | XP_010695844.1 | 1e-124 | (Beta vulgaris) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G25550.1 | 2e-91 | G2-like family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0024s0187.1.p |
Publications ? help Back to Top | |||
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