PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0022s0225.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NAC | ||||||||
Protein Properties | Length: 380aa MW: 42610.5 Da PI: 5.8224 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 101.8 | 9.4e-32 | 55 | 194 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk... 79 lp+G++F+P+d el+ e+L++k+ + + ++e+i+++d i+ ++P++Lp +k++ ++++fF++++++yatg+rk+r+++ Kaladp0022s0225.2.p 55 LPVGVKFDPSDLELI-EHLTAKCGLGNstshVFIDEFIPTLDgdqgICCTHPENLP-GAKKDGSSIHFFHRTANAYATGQRKRRKIQtql 142 799************.899999876664554333345666655667**********.556778899******************744346 PP NAM 80 ..sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 + +W++tgk+k+v++ +g ++g+kk++v+y + + k+ k++Wvmh+y+l Kaladp0022s0225.2.p 143 dkQVRWHKTGKTKPVFE-NGIQKGCKKIMVLYysSRKGFKPDKANWVMHQYHL 194 66999************.99**********996544566778*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-36 | 40 | 213 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 29.625 | 55 | 213 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-13 | 56 | 194 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence Send to blast |
MARTWIIDNI SIARKVKHGS KSPPLQIIDS GASRECPQCH YIIDNNDVIN EWPGLPVGVK 60 FDPSDLELIE HLTAKCGLGN STSHVFIDEF IPTLDGDQGI CCTHPENLPG AKKDGSSIHF 120 FHRTANAYAT GQRKRRKIQT QLDKQVRWHK TGKTKPVFEN GIQKGCKKIM VLYYSSRKGF 180 KPDKANWVMH QYHLGTDEEE KEGELVVSKI FYQHPKQNEY NDSSPVIKDC DVVQQHSSPK 240 TPKPTKRHRQ YSGTYTWDDD DADASTPFTV PEPALNPTIY DAHQPAIQMG DSEHTTWLAG 300 ESEAAEQLGL NDFDEYLLCK EIIGSYAPFK DPGPSRATYS YLDGNQSNLT EDNHISSGFA 360 DLENLELDTP PDFQLTVSC* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023915990.1 | 1e-152 | SUPPRESSOR OF GAMMA RESPONSE 1-like | ||||
TrEMBL | A0A2N9I3N0 | 1e-147 | A0A2N9I3N0_FAGSY; Uncharacterized protein | ||||
STRING | EOY02531 | 1e-142 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01600.1 | 4e-95 | NAC domain containing protein 44 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0022s0225.2.p |