PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0022s0225.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family NAC
Protein Properties Length: 394aa    MW: 44158.1 Da    PI: 5.4001
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0022s0225.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM101.71e-31551941128
                  NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk... 79 
                          lp+G++F+P+d el+ e+L++k+   +    + ++e+i+++d    i+ ++P++Lp  +k++ ++++fF++++++yatg+rk+r+++   
  Kaladp0022s0225.1.p  55 LPVGVKFDPSDLELI-EHLTAKCGLGNstshVFIDEFIPTLDgdqgICCTHPENLP-GAKKDGSSIHFFHRTANAYATGQRKRRKIQtql 142
                          799************.899999876664554333345666655667**********.556778899******************744346 PP

                  NAM  80 ..sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                            + +W++tgk+k+v++ +g ++g+kk++v+y  + +  k+ k++Wvmh+y+l
  Kaladp0022s0225.1.p 143 dkQVRWHKTGKTKPVFE-NGIQKGCKKIMVLYysSRKGFKPDKANWVMHQYHL 194
                          66999************.99**********996544566778*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-3640213IPR003441NAC domain
PROSITE profilePS5100529.62555213IPR003441NAC domain
PfamPF023651.4E-1356194IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MARTWIIDNI SIARKVKHGS KSPPLQIIDS GASRECPQCH YIIDNNDVIN EWPGLPVGVK  60
FDPSDLELIE HLTAKCGLGN STSHVFIDEF IPTLDGDQGI CCTHPENLPG AKKDGSSIHF  120
FHRTANAYAT GQRKRRKIQT QLDKQVRWHK TGKTKPVFEN GIQKGCKKIM VLYYSSRKGF  180
KPDKANWVMH QYHLGTDEEE KEGELVVSKI FYQHPKQNEY NDSSPVIKDC DVVQQHSSPK  240
TPKPTKRHRQ YSGTYTWDDD DADASTPFTV PEPALNPTIY DAHQPAIQMG DSEHTTWLAG  300
ESEAAEQLGL NDFDEYLLCK EIIGSYAPFK DPGPSRATYS YLDGNQSNLT EDNHISSGFA  360
DLENLELDTP PDFQLTGLDF GSQDAVFDRL DSL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_023915990.11e-159SUPPRESSOR OF GAMMA RESPONSE 1-like
TrEMBLA0A2N9I3N01e-153A0A2N9I3N0_FAGSY; Uncharacterized protein
STRINGEOY025311e-149(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.16e-94NAC family protein