PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0022s0036.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 317aa    MW: 34822.6 Da    PI: 5.2134
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0022s0036.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like66.83.6e-2160114156
              G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                          k r++Wt eL +rF+ea + L G++ AtP +ilelm+ + Lt+ h++SHLQkYR++
  Kaladp0022s0036.1.p  60 KDRVVWTIELNNRFIEAYNLL-GHQGATPCRILELMNDPRLTRFHIASHLQKYRTH 114
                          68*******************.9*******************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.06E-1558117IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.5E-2259117IPR009057Homeodomain-like
TIGRFAMsTIGR015579.5E-1960114IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    Send to blast
MYKQRKKLSA IDTDDDADEN SLHAGPPAPA DSTSTSAVRD SDPGRVKGSS SRGAAGLAKK  60
DRVVWTIELN NRFIEAYNLL GHQGATPCRI LELMNDPRLT RFHIASHLQK YRTHLREMRE  120
ELNPRRSKFR YNFNDPNSCS GSHNGSVVRS VAHQPPVDPA ESFTKFLSEM EDEELFALAQ  180
SQNQRIPSLS PASSRLSLGQ DDISSSDLDL ARILDSHEFN NIFSMLHNCV SRDTFSNSYV  240
GLKISNEGEL LLWDNAAAGQ AAGQFLNLEP INLSSTDVTG SPREFSPSGV SCIGIDSPES  300
CLYVGEVLDH LDSNIQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.24e-18response regulator 1