PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0020s0094.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 264aa MW: 28521 Da PI: 9.3982

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0020s0094.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.6	1.3e-38	37	96	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+ lkcprC s+ntkfCyynnys sqPryfCk+CrryWt+GGalrnvPvGgg+r+nk++s Kaladp0020s0094.1.p 37 ETVLKCPRCASMNTKFCYYNNYSHSQPRYFCKTCRRYWTQGGALRNVPVGGGCRRNKRNS 96 6779*****************************************************987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	4.0E-32	20	94	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	5.0E-33	38	94	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.938	40	94	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	42	78	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence Send to blast
MLPNSPPPQQ PAIHYQGTIR PGSMTDRARM ANMPIPETVL KCPRCASMNT KFCYYNNYSH 60 SQPRYFCKTC RRYWTQGGAL RNVPVGGGCR RNKRNSSKVG GGGSSGIARS KSPAHSGSTP 120 SNSIGYSSGE LIRHGSHIHP RNSLMAPLNL HFSDYSAEDI GVSCPGMIPR VSSSADHFNL 180 LTGNGNTATS SSETDPWTFI HQHQLAQVYH HPSSFGGNLE APLTETPSLY GVEGHVNASQ 240 PTKNKLPCTA DTQLDLLKLE KGI*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02460.1	4e-42	Dof family protein

Link Out ? help Back to Top
Phytozome	Kaladp0020s0094.1.p