PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0019s0033.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 320aa    MW: 35766.5 Da    PI: 6.6334
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0019s0033.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.71e-13153200355
                          HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          ++h ++Er+RR+++N+++  L  ++P +     kK++Ka++Le A++Y+k+Lq
  Kaladp0019s0033.1.p 153 ENHIKAERNRREKLNQRIIALSAVIPGL-----KKMDKATVLEDATKYVKQLQ 200
                          689*************************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000839.66E-14148204No hitNo description
PROSITE profilePS5088815.872150199IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.28E-17152211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.3E-11153200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.7E-16153210IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.3E-14156205IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MDQDQIFTSQ WKVNSHADLS CSIPMEPAFP DALQHSNLLF DYPLPPIFGT TMNDFQSNNP  60
VEHLATDTWR SLDVSNSDSA ADAVSFLNSA WPNPTGVAWP KRENHCYDSQ VQQFPNNEYT  120
IWNENYGSKA GPEAKSKAIR NVSAATRSSE AEENHIKAER NRREKLNQRI IALSAVIPGL  180
KKMDKATVLE DATKYVKQLQ EQIKMLEKQT KSGTIIESAV VVKKTLLVIN DDNITGFSNE  240
SSFIERTLPD ESLPEIEARF CDRKVLIRVH CDRKKRVAEK ILSEIEKLHM TVLNSSVLAF  300
GSAAINVAVI AKVKFGFNA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.12e-44bHLH family protein