PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0015s0033.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 524aa MW: 57238.4 Da PI: 8.277 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 32.8 | 1.5e-10 | 398 | 456 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i eLe kv++L++e ++L ++ l+ e+a l s++ Kaladp0015s0033.3.p 398 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQVTILQRESAGLSSQN 456 9**************************************************99999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.5E-18 | 394 | 458 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.185 | 396 | 459 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.34E-11 | 398 | 452 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 8.2E-12 | 398 | 455 | No hit | No description |
Pfam | PF00170 | 7.9E-10 | 398 | 456 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 3.63E-24 | 399 | 450 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 524 aa Download sequence Send to blast |
MPKHNMSLNH QLELTHLNTS LNGAPMQHFG QGHGVDYGKR AIVSPSHNGQ IPPLSPYSHL 60 PLSRTSVQSM GSQSFVRSPS HSRSLSQPQV FNLDLLPPLS PSPFRDSPPT NPLSVDINMD 120 DRDASSHFLP PSSYARTNGA TRPGESLPPR KAHRRSNSDI PSGFSMVMQS SPPLLPLKSP 180 TTVERPASDR ENGARTNQSI SRTSWNKVID NNGEVTGERK SEGEVIDDLF NAYMNLDSID 240 VTKPAVNGEK KTNEHREDLD SRASGSNTNA GENSDNEAES SINESGNGIV KVGTSGSGCT 300 QKREGIKRSA VGDIAPTARH YRSISMDSFM GNMHFGEELP KLHPSPGPCS GEISPSNSLE 360 KNSNTFSLEF GNGEFSGAEL KKIMANDKLA EIALADPKRA KRILANRQSA ARSKERKMRY 420 ISELEHKVQT LQTEATTLSA QVTILQRESA GLSSQNNELK FRLQAMEQQA QLRDALSEAL 480 SAEVQRLKLA TQELSNNVQM YQQQSSQYNT LRNGMSSKHD STN* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_023883422.1 | 0.0 | transcription factor RF2a | ||||
TrEMBL | A0A2N9G6H5 | 0.0 | A0A2N9G6H5_FAGSY; Uncharacterized protein | ||||
STRING | VIT_03s0038g00860.t01 | 0.0 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 1e-129 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0015s0033.3.p |