PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0011s0808.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family BES1
Protein Properties Length: 320aa    MW: 34733.7 Da    PI: 8.215
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0011s0808.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822215.51.2e-6631442149
               DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91 
                          +++r ptw+ErEnnkrRERrRRaiaakiyaGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++++g+sas+sp+
  Kaladp0011s0808.1.p   3 TGTRLPTWRERENNKRRERRRRAIAAKIYAGLRMYGNYKLPKHCDNNEVLKALCNEAGWIVEEDGTTYRKGCKPSERMDVIGCSASVSPC 92 
                          789*************************************************************************************** PP

               DUF822  92 sslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsss 149
                          ss+q        +sp++sy++sp sssfpsps++ ++++ +    sl+p+l++ls+ s+s
  Kaladp0011s0808.1.p  93 SSYQ--------PSPCASYNPSPPSSSFPSPSRTPTNTNGKRdaDSLIPWLKNLSSGSNS 144
                          ****........********************9988776554569*********986665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.0E-664139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MTTGTRLPTW RERENNKRRE RRRRAIAAKI YAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WIVEEDGTTY RKGCKPSERM DVIGCSASVS PCSSYQPSPC ASYNPSPPSS SFPSPSRTPT  120
NTNGKRDADS LIPWLKNLSS GSNSVSSKLL HHHLQMHGGS ISAPITPPLS SPTCRTPRIR  180
FDWENGNPNG NFNAGSVQPF FTSSVQQATQ GQMLPESWLG GFQIPQAPTS PTFSLVSRNP  240
FDIRNEVQDG GGSRMWTPGQ SGTCSPAIPA GVDHSADVPM SDAMASEFAF GNSSSGLVKA  300
WEGERIHEES GSDDLELKL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A2e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B2e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C2e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D2e-24676372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009352718.11e-142PREDICTED: BES1/BZR1 homolog protein 4-like
SwissprotQ9ZV881e-119BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A498JVF11e-135A0A498JVF1_MALDO; Uncharacterized protein
STRINGXP_009352718.11e-141(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-102BES1/BZR1 homolog 4