PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0011s0049.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NAC | ||||||||
Protein Properties | Length: 516aa MW: 57670.7 Da PI: 7.3929 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 157.3 | 6.4e-49 | 30 | 157 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 +pGfrFhPt+eelv +yL++kvegk++++ e i+ +d+y+++Pw+Lp++++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ Kaladp0011s0049.2.p 30 MPGFRFHPTEEELVEFYLRRKVEGKRFTV-ELITFLDLYRYDPWELPAMAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRM 118 79*************************99.89***************888889************************************* PP NAM 92 vlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + s +++ +glkktLvfy+g+apkg +t+W+m+eyrl Kaladp0011s0049.2.p 119 IRSDnlSRSSIGLKKTLVFYSGKAPKGIRTSWIMNEYRL 157 **98777888***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 2.62E-55 | 28 | 183 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 55.624 | 29 | 184 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.6E-24 | 31 | 157 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 516 aa Download sequence Send to blast |
MNEPVNDEQR PIEQQEDQEE VGDRQQEMVM PGFRFHPTEE ELVEFYLRRK VEGKRFTVEL 60 ITFLDLYRYD PWELPAMAAI GEKEWFFYVP RDRKYRNGDR PNRVTTSGYW KATGADRMIR 120 SDNLSRSSIG LKKTLVFYSG KAPKGIRTSW IMNEYRLPHH ETEKHHKQHQ HQQAEISLCR 180 VYKRAGVEDH PSLVRSLPST SSMRPSSTSS SSRGSGQSSN SDRRKHSTDN NQFAAASMGR 240 SNAFQAAFGA SVGLLSSHHH HQQHLFIVNN CSMANDATTD GSSSNTTATT TDNVTTTLRL 300 SKIKNGSSTA INPPAAADAA LSKDNDSYCL TPIGGIAAAV FPSSSSSVLG LLLAEEAHHH 360 MTNQDKMNML IPSPNHHYAD DTSSSISKTQ FAGASSAPML INKPYHGDDI NSDDELHKLV 420 LNYHHQQPPN QQLIQFHNSH NNLHIHHNPT TNQFPSVMLP SQSHLLSFSN SLRGTSVNST 480 ANPAAAFSDR FWEWNPIISE ASRSGYDINN NSQFK* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-53 | 19 | 184 | 7 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-53 | 19 | 184 | 7 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-53 | 19 | 184 | 7 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-53 | 19 | 184 | 7 | 165 | NO APICAL MERISTEM PROTEIN |
4dul_A | 3e-53 | 19 | 184 | 7 | 165 | NAC domain-containing protein 19 |
4dul_B | 3e-53 | 19 | 184 | 7 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00257 | DAP | Transfer from AT2G02450 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2C9VPE6 | 1e-119 | A0A2C9VPE6_MANES; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02450.1 | 2e-95 | NAC domain containing protein 35 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0011s0049.2.p |