PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0010s0130.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family G2-like
Protein Properties Length: 213aa    MW: 23061.7 Da    PI: 6.9554
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0010s0130.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.91.5e-302779254
              G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54
                         pr+rWt eLH++F  av++LGG+e+AtPk i++lm+vkgLt++hvkSHLQ+YR
  Kaladp0010s0130.1.p 27 PRMRWTRELHDAFELAVQRLGGEERATPKMIMQLMDVKGLTISHVKSHLQMYR 79
                         9**************************************************** PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.4E-282380IPR009057Homeodomain-like
SuperFamilySSF466894.66E-152679IPR009057Homeodomain-like
TIGRFAMsTIGR015575.4E-232779IPR006447Myb domain, plants
PfamPF002492.5E-72879IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    Send to blast
MDMQQGSGGA SGSNGLTVRP YVRSAAPRMR WTRELHDAFE LAVQRLGGEE RATPKMIMQL  60
MDVKGLTISH VKSHLQMYRG VKHERMIRDA LRSGREIRRH HHALDYKDFF SYGSGAGCEP  120
EAGSWSEEKG RKGSGVTSEE CLSESNQTAE WGGPKQTGSY IVFKDLFPGP ASMHQESEVG  180
SRQEECSTEN ASAGSGPPST SGAGVSLELT LG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A3e-182883459Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B3e-182883459Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A3e-182883358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B3e-182883358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C3e-182883358Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D3e-182883358Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A3e-182883459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C3e-182883459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D3e-182883459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F3e-182883459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H3e-182883459Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J3e-182883459Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1U8PWB53e-34A0A1U8PWB5_GOSHI; uncharacterized protein LOC107963440
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.13e-28G2-like family protein