PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0007s0087.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | G2-like | ||||||||
Protein Properties | Length: 168aa MW: 18398 Da PI: 7.5833 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 65.7 | 8.1e-21 | 111 | 159 | 2 | 51 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 p+l+Wt++LH++F+ a++ L G ekA Pk+i e+m+v gLt+++v SHLQ Kaladp0007s0087.2.p 111 PKLVWTTQLHNKFLCALDIL-GLEKAQPKKIHEVMNVAGLTRANVVSHLQ 159 89******************.***************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.27E-13 | 109 | 161 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.2E-19 | 109 | 159 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 1.1E-18 | 110 | 160 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence Send to blast |
MHKPVSTAEL KNIWQFIYRY SGKAIMNDHT ENFSEDVGGS SCGSSTPGDP HFIAVSGAAT 60 QLWEGNSNAV EDPLKMYNTR CVQHADGMQI REAIVNNNAP LPVVPRTGNN PKLVWTTQLH 120 NKFLCALDIL GLEKAQPKKI HEVMNVAGLT RANVVSHLQV MCPYTIV* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1irz_A | 4e-15 | 109 | 159 | 4 | 54 | ARR10-B |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 2e-17 | response regulator 2 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0007s0087.2.p |