PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0001s0109.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 386aa MW: 41562.1 Da PI: 6.1922 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 70.9 | 1.9e-22 | 248 | 310 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e++lk errkq+NRe+ArrsR+RK+ae+eeL+ kv++L aeN++Lk+e+++l k+++klk e+ Kaladp0001s0109.4.p 248 ERQLKQERRKQSNRESARRSRLRKQAETEELAAKVDVLMAENMTLKSEINQLIKNSEKLKFEN 310 799********************************************************9876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 2.6E-26 | 1 | 92 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Gene3D | G3DSA:1.20.5.170 | 1.6E-15 | 246 | 308 | No hit | No description |
SMART | SM00338 | 9.9E-19 | 248 | 312 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.9E-20 | 248 | 310 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 12.449 | 250 | 313 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.38E-11 | 251 | 307 | No hit | No description |
CDD | cd14702 | 1.83E-19 | 253 | 299 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 255 | 270 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 386 aa Download sequence Send to blast |
MGNNEESKSL KPDTTPLDQN GIHVYPPPDW AAMQAFYGPR IPLPQYYNSA YPAGHPPHPF 60 MWGPPQAMMP SFSAPYAAIY PQGGVYAHPG VPLGSPKPGF GALSTPSTTE ASAATALTIQ 120 IPGKTSGNTT GGSRDSESGD SGGSSGGSRE KTSADEQSHR KRKCEQSLDI EKTVKIEIQA 180 NSIAPVDTNL ESSMVAGIAV GPAANGKLEN VTVLDLDMKP NHIVNSKMSF DAQQSGSKLS 240 SEACFQSERQ LKQERRKQSN RESARRSRLR KQAETEELAA KVDVLMAENM TLKSEINQLI 300 KNSEKLKFEN ARMMTEETER IGFNNADDSR SQTLSTENLL SRVNNSGSVV TPEEEGEMHG 360 NNNSNPTKLR QLLDASPRAD AVAAS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 264 | 270 | RRSRLRK |
2 | 264 | 271 | RRSRLRKQ |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00318 | DAP | Transfer from AT2G46270 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021613119.1 | 1e-106 | common plant regulatory factor 1-like isoform X2 | ||||
TrEMBL | A0A2P5E8F9 | 1e-106 | A0A2P5E8F9_TREOI; Basic-leucine zipper transcription factor | ||||
STRING | cassava4.1_008459m | 1e-106 | (Manihot esculenta) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.2 | 3e-35 | G-box binding factor 3 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0001s0109.4.p |