PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl01772_0020
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C2H2
Protein Properties Length: 297aa    MW: 33922.3 Da    PI: 6.287
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl01772_0020genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H223.71.2e-0778100123
                    EEETTTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                    y C+ C+ +Fs+  +L++H+rtH
  kfl01772_0020  78 YACTVCDATFSQAQHLQVHQRTH 100
                    89********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576677.7E-1675124No hitNo description
Gene3DG3DSA:3.30.160.604.4E-137797IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003554.7E-478100IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015716.16578105IPR007087Zinc finger, C2H2
PROSITE patternPS00028080100IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.30.160.603.1E-1298125IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SMARTSM003551.8106129IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015711.635106134IPR007087Zinc finger, C2H2
PROSITE patternPS000280108129IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    Send to blast
MGLLLFFRAG REAIDPPYPR DSSLRLKKRC WVFGIDTLGD DEGQEAPQEG LPPELYEVVA  60
QEYASRHFAI SPADAHPYAC TVCDATFSQA QHLQVHQRTH TGERPYACTE CKDDFAQSTH  120
LRTHTYYYHT TEGKQKRKRE EVRIAKLLEG SSIDFKREHY VNFGCLQGTF ARADFVIIQN  180
GKVVVLEVDE YQHESYGVAC DVARMAKIYE AWLLEGNGLP VRFLRYNPNA YHVDGKKQKV  240
KRAAREERLL EAIREASEAD GDGMQVRYMY YDVVSGKPAI MQDPAFTISD CCVEAIY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mey_C3e-1277125456CONSENSUS ZINC FINGER
1mey_F3e-1277125456CONSENSUS ZINC FINGER
1mey_G3e-1277125456CONSENSUS ZINC FINGER
2i13_A1e-115312577157Aart
2i13_B1e-115312577157Aart
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IS060.0A0A1Y1IS06_KLENI; Zinc finger-containing protein