PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl01575_0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | ZF-HD | ||||||||
Protein Properties | Length: 242aa MW: 25328.3 Da PI: 7.277 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 44.5 | 3.5e-14 | 19 | 67 | 9 | 57 |
ZF-HD_dimer 9 ClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrev 57 Cl Nh + G+ + DGC+ f+p++++ ++ C ACgCHR +H ++ kfl01575_0010 19 CLNNHDLEAGAPVHDGCQAFVPKRHAGLEPPEDVCDACGCHRAYHQKTG 67 ***********************999899****************9975 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51523 | 14.221 | 16 | 66 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
ProDom | PD125774 | 1.0E-6 | 19 | 75 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 4.7E-12 | 19 | 66 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence Send to blast |
MYAGGGWGGG LLAGHDGPCL NNHDLEAGAP VHDGCQAFVP KRHAGLEPPE DVCDACGCHR 60 AYHQKTGSAQ AQQPPPIGGA KKGLFERSSG FRPPPLTLAR AKGSTAMDNS EDDDPMAHLL 120 PHLAARRAQK RSLEEEGPAL DVGGEEARAP RRSGGVAIGG GEHICGRGEL ADVRAVEESM 180 FKAAVEESTR ASKAEAAHGK SEPQRVSPKT DPCSARYVFS PGPPASVSKK TSSRTWQFGP 240 VL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1IRJ6 | 1e-148 | A0A1Y1IRJ6_KLENI; Uncharacterized protein (Fragment) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60480.1 | 4e-12 | homeobox protein 26 |