PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | kfl01106_0010 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
|
||||||||
Family | ZF-HD | ||||||||
Protein Properties | Length: 205aa MW: 22248.5 Da PI: 9.9312 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 66.4 | 5.3e-21 | 38 | 91 | 4 | 56 |
ZF-HD_dimer 4 vrYkeClkNhAaslGg.havDGCgEfmpsegeegtaaalkCaACgCHRnFHRre 56 ++ C kNhA + G+ +avDGC Ef+p + + + ++ l CaACgCHRnFH ++ kfl01106_0010 38 PHWGACNKNHALRSGApYAVDGCTEFLPLSLDPSAPEHLVCAACGCHRNFHLKD 91 57889**********869**********97777******************886 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD125774 | 1.0E-8 | 40 | 97 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 18.193 | 40 | 91 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 6.3E-19 | 40 | 91 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 1.3E-17 | 42 | 90 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
SuperFamily | SSF46689 | 1.47E-10 | 117 | 188 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.8E-17 | 124 | 188 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01565 | 8.1E-17 | 127 | 184 | IPR006455 | Homeodomain, ZF-HD class |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 205 aa Download sequence Send to blast |
MAAPVDEHLA LKVQDIPPAP PFQNLAVIPE AGMLEKRPHW GACNKNHALR SGAPYAVDGC 60 TEFLPLSLDP SAPEHLVCAA CGCHRNFHLK DGQRPILYAT IAPKAGFKKG KGAGGAGAAP 120 FDSVAGQKRK RSQFTPEQRD AMLRFAESIN WTTTKQDKSV IQQFCSQIGI DKSNFTHFLH 180 NIKKKRSKQA QPQQAAGQVP YATGP |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1IPU3 | 1e-151 | A0A1Y1IPU3_KLENI; Zinc finger-homeodomain protein |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Representative plant | OGRP91 | 16 | 237 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24660.1 | 3e-23 | homeobox protein 22 |