PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl01002_0030

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

C2H2

Protein Properties

Length: 372aa MW: 39699.5 Da PI: 8.4209

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl01002_0030	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.5	0.0009	147	169	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ Cg +F + L H+r+H kfl01002_0030 147 YGCNLCGAHFAYPQALGGHMRLH 169 67*******************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF57667	2.55E-6	144	171	No hit	No description
Gene3D	G3DSA:3.30.160.60	9.3E-5	145	169	IPR013087	Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profile	PS50157	10.055	147	169	IPR007087	Zinc finger, C2H2
Pfam	PF13912	2.1E-6	147	170	IPR007087	Zinc finger, C2H2
PROSITE pattern	PS00028	0	149	169	IPR007087	Zinc finger, C2H2

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003676	Molecular Function	nucleic acid binding
GO:0046872	Molecular Function	metal ion binding

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence Send to blast
MPGSRGEGDE TPVETGNRLA LNDAAGQQGA AERVGNFKGD RLRGGYRAEG PVTCLGQRNC 60 GASENPVKRK AWNSGFARQD YSAVPLKVHA YKIRRQESQD GGLTVSACSD LSLLDEPVSL 120 RDQSADRPTG LWQNPQNDLL EGRRRPYGCN LCGAHFAYPQ ALGGHMRLHR NVIAAAQSPS 180 DLFSVFRPPS SQCHSFASGA RSSGGPCRQA DPRAAVLQAL DSRLLSLGNG VGDLTSSRGN 240 SGMLGLDKAV KSCTTSDKPK RECLAGLVNQ RELKTTASSP QHDNLLIGPL SSPTQIPEAS 300 AEPPSCLIYL PSQGAFPGGW FELEHVDVRH PERIAPVNLG GNHKLVAEQV LEALVRQAER 360 PTSAAVHPAI PK

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence Send to blast

MPGSRGEGDE TPVETGNRLA LNDAAGQQGA AERVGNFKGD RLRGGYRAEG PVTCLGQRNC  60
GASENPVKRK AWNSGFARQD YSAVPLKVHA YKIRRQESQD GGLTVSACSD LSLLDEPVSL  120
RDQSADRPTG LWQNPQNDLL EGRRRPYGCN LCGAHFAYPQ ALGGHMRLHR NVIAAAQSPS  180
DLFSVFRPPS SQCHSFASGA RSSGGPCRQA DPRAAVLQAL DSRLLSLGNG VGDLTSSRGN  240
SGMLGLDKAV KSCTTSDKPK RECLAGLVNQ RELKTTASSP QHDNLLIGPL SSPTQIPEAS  300
AEPPSCLIYL PSQGAFPGGW FELEHVDVRH PERIAPVNLG GNHKLVAEQV LEALVRQAER  360
PTSAAVHPAI PK

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1IS95	0.0	A0A1Y1IS95_KLENI; Uncharacterized protein