PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00982_0030
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C2H2
Protein Properties Length: 293aa    MW: 33450.1 Da    PI: 7.8936
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00982_0030genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.90.000331439123
                   EEET..TTTEEESSHHHHHHHHHH.T CS
        zf-C2H2  1 ykCp..dCgksFsrksnLkrHirt.H 23
                   y+C+   C++ F+ + +Lk Hi   H
  kfl00982_0030 14 YVCQeaGCTEAFTWSGSLKEHIFYyH 39
                   99*******************97666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.160.601.4E-11235IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576671.73E-9243No hitNo description
PROSITE profilePS5015710.8031444IPR007087Zinc finger, C2H2
PROSITE patternPS0002801639IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MTAHKRVHSG ERPYVCQEAG CTEAFTWSGS LKEHIFYYHT ADRQQRRKQE EERVAKALTK  60
AQIDFKREHQ VDFGCLQGTF ARTDFIVLMG GKVIIVKVDE YQHESYGISC EVARMLQIQK  120
ALMLEENELP VHILRYNPHT FHIDGIKKRV TRQIREERLV EAIHKHACSQ TARLGFETLT  180
GLDMQRDVEA SFFMEINGLI PTEQGTPSVT NARHTDPADV RHSGTRCTQS YGTCSLAVRQ  240
LRRHVYASHE HAKQVLQLLQ AQPLLSELPV TLGTVLGREK GLNPASFDPV EYL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IQK81e-116A0A1Y1IQK8_KLENI; Uncharacterized protein