PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00982_0030 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | C2H2 | ||||||||
Protein Properties | Length: 293aa MW: 33450.1 Da PI: 7.8936 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.9 | 0.00033 | 14 | 39 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+C+ C++ F+ + +Lk Hi H kfl00982_0030 14 YVCQeaGCTEAFTWSGSLKEHIFYyH 39 99*******************97666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.160.60 | 1.4E-11 | 2 | 35 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
SuperFamily | SSF57667 | 1.73E-9 | 2 | 43 | No hit | No description |
PROSITE profile | PS50157 | 10.803 | 14 | 44 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 16 | 39 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003676 | Molecular Function | nucleic acid binding | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence Send to blast |
MTAHKRVHSG ERPYVCQEAG CTEAFTWSGS LKEHIFYYHT ADRQQRRKQE EERVAKALTK 60 AQIDFKREHQ VDFGCLQGTF ARTDFIVLMG GKVIIVKVDE YQHESYGISC EVARMLQIQK 120 ALMLEENELP VHILRYNPHT FHIDGIKKRV TRQIREERLV EAIHKHACSQ TARLGFETLT 180 GLDMQRDVEA SFFMEINGLI PTEQGTPSVT NARHTDPADV RHSGTRCTQS YGTCSLAVRQ 240 LRRHVYASHE HAKQVLQLLQ AQPLLSELPV TLGTVLGREK GLNPASFDPV EYL |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A1Y1IQK8 | 1e-116 | A0A1Y1IQK8_KLENI; Uncharacterized protein |