PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00979_0030
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family SBP
Protein Properties Length: 828aa    MW: 87405.3 Da    PI: 9.4085
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00979_0030genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP118.53.3e-3733109177
                    --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
            SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                    +C +egC adls  k+yh+rhkvCevh++a+++l++g+  rfCqqCsrfh + efDe+krsCrrrL +hn+rrrkk+
  kfl00979_0030  33 VCLIEGCGADLSGSKDYHQRHKVCEVHARAASALHKGQLMRFCQQCSRFHPVAEFDEGKRSCRRRLLGHNKRRRKKE 109
                    6**************************************************************************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.1100.101.6E-303195IPR004333Transcription factor, SBP-box
PROSITE profilePS5114130.01731108IPR004333Transcription factor, SBP-box
SuperFamilySSF1036128.11E-3432109IPR004333Transcription factor, SBP-box
PfamPF031109.1E-3034108IPR004333Transcription factor, SBP-box
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 828 aa     Download sequence    Send to blast
MNSSGNAHKS SGSLERHDSD KRPRPSFAGA SIVCLIEGCG ADLSGSKDYH QRHKVCEVHA  60
RAASALHKGQ LMRFCQQCSR FHPVAEFDEG KRSCRRRLLG HNKRRRKKED PASEPDDHPA  120
PHRPHFNMAT SALPYDAHEE VRRRKGAAAP EHTPPRRLGQ GLSLSPFSPH EAAPASDGPS  180
LSQFLRDSGV APRAPDGSLS SLLMGAPPQQ TADFLGRTLG LSASQQLLLG FQPQRSANQE  240
LKPEARNTLQ LHFPPSSATS LLPAAGARQS PSLQQLLDKS AGGHSLSSPG RHATAGGEAS  300
SLFPLPNSLE AGGSPWAGQL EGLVGGQRGG GLNHNSAPYL PQDRTGRISF KLFDKNPNDL  360
PDDLRDQILD WLQRRPSAME TYLRPGCVHV SAYLAMPHPD WDALERDLLP LLAGLVRSQA  420
WAGGTFTAFT TSMEAHVEQG VVQRVCPLTP AQGPVLLSVH PRCLVAGQPV EMTVTGRGLL  480
HANNRLVCLH NGQRFLDSRP SAAPARPGTS SGRGLPVSWS HDDDAPLAPS PPRCGGQEWS  540
PRVGAGPVGP SSWSADPVTG VETLVWTMAG PPPEARGSMF LEVDRGGCPS NMKPLLVADA  600
ALAAELAQLD AQLHSSGPPD SAARRAAESS ADALVADLGW ALGGQRKEGK SARLAAWARE  660
RGWRHTAERI RGSGGPAEVP SGERAAFSGK AARRAASAAM GVPGVPGQAA PDNMTLNGTR  720
KENLGALHSS VKQGTREQGA AGKPSPVWQQ VVRQAPGGGG QLGSKGGQQV PVGFGCTIGT  780
GPWQGEAGAA RRLVTAVYSA AISRTRVCLS EREPAQTVCS LVWGPVCV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ul4_A7e-27331071084squamosa promoter binding protein-like 4
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12024KRPRP
2103108RRRKKE
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00060PBMTransfer from AT3G60030Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1ISR50.0A0A1Y1ISR5_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP9717230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76580.14e-26SBP family protein