PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00942_0060
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C2H2
Protein Properties Length: 693aa    MW: 77340.3 Da    PI: 5.9451
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00942_0060genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.74.1e-05470494123
                    EEET..TTTEEESSHHHHHHHHHHT CS
        zf-C2H2   1 ykCp..dCgksFsrksnLkrHirtH 23 
                    y C+   Cgk F ++ +L+ H rtH
  kfl00942_0060 470 YACShpGCGKAFAQSIHLTLHERTH 494
                    789999******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5015712.84441469IPR007087Zinc finger, C2H2
SMARTSM0035599446464IPR015880Zinc finger, C2H2-like
Gene3DG3DSA:3.30.160.605.4E-11447470IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
SuperFamilySSF576673.16E-20450503No hitNo description
PROSITE profilePS5015716.81470499IPR007087Zinc finger, C2H2
SMARTSM003550.0016470494IPR015880Zinc finger, C2H2-like
Gene3DG3DSA:3.30.160.601.2E-17471493IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE patternPS000280472494IPR007087Zinc finger, C2H2
SuperFamilySSF576674.43E-5494525No hitNo description
Gene3DG3DSA:3.30.160.608.2E-12494527IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PROSITE profilePS5015710.408500530IPR007087Zinc finger, C2H2
SMARTSM003554.7500525IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280502525IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 693 aa     Download sequence    Send to blast
MFQNAFQRIE DAGGSALTYE GHISMLCELQ NPPSGERLVF EELGAIVAFI ESLLRSTVWQ  60
SAGSTLSVYE QTDAGPQKVL VYSNQPEKKH AGKKRGAQKK DNEAPAGKRF SPKQHGVADS  120
VDVAMDICSK LSTENAATLK LHAEVENRRQ QLEVEKIQAA REGQQAAIRA REDQRHFALE  180
CLRRKTEACA KMCDQQEALK GRLLTMQEER EIAERMEQRH IPPVARSITP SKQGTVSTGC  240
PPIGEESTER NVLDNNNGPW SPVEDDKSSA NEGWESHCQI QVQSEAPPQI NTLDAEVFAL  300
RSKNTGPRNA KVFSCPVRDS VRHKGLERGL GLEPLWAGFL AGGMAAQSEP VQSAGEQARL  360
QAQERVHLWY LHKGLPFVWE LGWEPQLGLQ WALRWGLQLV RVLEPQSELE EGGLVVVLDS  420
LLQEVEGSVS LLAGVGESSV LSLEAGCGAA FTQGTQLRTH ERTHTGEKPY ACSHPGCGKA  480
FAQSIHLTLH ERTHTGEKPY KCIEADCEEA FSRGDPLKTH TFYYHTKEGQ QRRKREEERI  540
AKLLTKAGLP FKREHHVTFD CLGGSFARID FILDHKGKII VIEVDEYQHE GYGVACDVAR  600
MLQIYEAWAI EGNSLPVHII RYNPHAFQID GKRAAVTRKI REARLLEAID EAAEMESEGL  660
YVQYMYYDLK DGKPTIMEDE AFTITDCCLD AIV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mey_C1e-214475201079CONSENSUS ZINC FINGER
1mey_F1e-214475201079CONSENSUS ZINC FINGER
1mey_G1e-214475201079CONSENSUS ZINC FINGER
2i13_A2e-2144752027180Aart
2i13_B2e-2144752027180Aart
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IMS10.0A0A1Y1IMS1_KLENI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06634.25e-13C2H2 family protein