PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | kfl00914_0030 | ||||||||
Common Name | KFL_009140030 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
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Family | HB-other | ||||||||
Protein Properties | Length: 412aa MW: 43932.7 Da PI: 4.8019 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 55.5 | 9.5e-18 | 93 | 147 | 3 | 57 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +R+++t++q +eLe+lF+ ++ a++r+ L+++ gL+++q+ +WFqNrRa+e++ kfl00914_0030 93 RRQKLTQKQAQELEALFQADPSGPAARRAALSQQFGLPQQQIANWFQNRRARERN 147 699**************************************************95 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 7.4E-17 | 75 | 148 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 9.61E-16 | 87 | 148 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 15.516 | 88 | 148 | IPR001356 | Homeobox domain |
SMART | SM00389 | 5.3E-14 | 90 | 152 | IPR001356 | Homeobox domain |
CDD | cd00086 | 6.36E-15 | 93 | 149 | No hit | No description |
Pfam | PF00046 | 3.8E-15 | 93 | 146 | IPR001356 | Homeobox domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 412 aa Download sequence Send to blast |
MRSASTPSGT GSNQQLASVG TRPDFAERGS GSQGPDTSPE LPGSDSREFS FPAADDVGPS 60 QQLAATGARP PGEPGSRTSD DDAEESPEKG GGRRQKLTQK QAQELEALFQ ADPSGPAARR 120 AALSQQFGLP QQQIANWFQN RRARERNMEL QQDFETVRRC LRAAFEENLM LRRQLEELRA 180 EHALCPPRGS AKPDADAFQM SFPSRSGQMT WQAPAFGSSP HLLFPPTASP PLKRPPRSVS 240 ESALPKRARV GSPPEATAFS GPSFRSQTPV GERNPDSLSN DRFGGLPFGQ LAPARAPPML 300 ASAPLPTTTT PTWPLTLDEA FRDLLRGDQG TSGISAAPQG YLGDPFRPLP GGVGLTIRPL 360 SPFDLGALPP LEPGSDAARI PPEIGGAPGP YADASEDLPG NLDPEVPPWW ED |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0U9HLF7 | 0.0 | A0A0U9HLF7_KLENI; Homeobox-leucine zipper protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16780.1 | 1e-13 | homeobox protein 2 |
Publications ? help Back to Top | |||
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